RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 GRSF1Q12849 480 aaKnown RBP eCLIP14.05□□□□□ -0.16
USP39-207ENST00000450066 PON2Q15165 354 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 KHDC1Q4VXA5 237 aaKnown RBP14.05□□□□□ -0.16
USP39-207ENST00000450066 AGBL4Q5VU57 503 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 SEL1L3Q68CR1 1132 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 ZNF776Q68DI1 518 aaPredicted RBP14.05□□□□□ -0.16
USP39-207ENST00000450066 EPGNQ6UW88 154 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 SBSNQ6UWP8 590 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 DET1Q7L5Y6 550 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 PHYKPLQ8IUZ5 450 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 KIRREL3Q8IZU9 778 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 IL17RCQ8NAC3 791 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 OR2T3Q8NH03 318 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 AGR3Q8TD06 166 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 ASB2Q96Q27 587 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 PHF7Q9BWX1 381 aaPredicted RBP14.05□□□□□ -0.16
USP39-207ENST00000450066 C1QTNF3Q9BXJ4 246 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 FBRSQ9HAH7 460 aa14.05□□□□□ -0.16
USP39-207ENST00000450066 APOBEC2Q9Y235 224 aaKnown RBP14.05□□□□□ -0.16
USP39-207ENST00000450066 PIKFYVEQ9Y2I7 2098 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 SOX1O00570 391 aaPredicted RBP14.04□□□□□ -0.16
USP39-207ENST00000450066 TSPAN6O43657 245 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 SGTAO43765 313 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 SOD1P00441 154 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 ENO3P13929 434 aaPredicted RBP14.04□□□□□ -0.16
USP39-207ENST00000450066 SCTRP47872 440 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 HK3P52790 923 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 COPAP53621 1224 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 CORO7P57737 925 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 TUBB3Q13509 450 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 STARD3Q14849 445 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 TGFBIQ15582 683 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 CYHR1Q6ZMK1 362 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 ALYREFQ86V81 257 aaKnown RBP14.04□□□□□ -0.16
USP39-207ENST00000450066 STON2Q8WXE9 905 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 SHCBP1LQ9BZQ2 653 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 NUDT4Q9NZJ9 180 aa14.04□□□□□ -0.16
USP39-207ENST00000450066 SNX2O60749 519 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 CCDC22O60826 627 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 SIX3O95343 332 aaPredicted RBP14.03□□□□□ -0.16
USP39-207ENST00000450066 FTH1P02794 183 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 GLULP15104 373 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 RPS14P62263 151 aaKnown RBP14.03□□□□□ -0.16
USP39-207ENST00000450066 GBX1Q14549 363 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 PPP1R3AQ16821 1122 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 SH2D4BQ5SQS7 431 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 FAM91A1Q658Y4 838 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 KIAA1211LQ6NV74 962 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 FRA10AC1Q70Z53 315 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 RPS27LQ71UM5 84 aaKnown RBP14.03□□□□□ -0.16
USP39-207ENST00000450066 TRMT11Q7Z4G4 463 aaKnown RBP14.03□□□□□ -0.16
USP39-207ENST00000450066 CUZD1Q86UP6 607 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 FAR2Q96K12 515 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 FAM126AQ9BYI3 521 aaPredicted RBP14.03□□□□□ -0.16
USP39-207ENST00000450066 CD274Q9NZQ7 290 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 CNOT6Q9ULM6 557 aaKnown RBP14.03□□□□□ -0.16
USP39-207ENST00000450066 FCHO1O14526 889 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 GRID2O43424 1007 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 DIAPH2O60879 1101 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 ADAM23O75077 832 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 SERPINA6P08185 405 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 EEF1DP29692 281 aaKnown RBP14.03□□□□□ -0.16
USP39-207ENST00000450066 TAS2R38P59533 333 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 TMEM115Q12893 351 aaPredicted RBP14.03□□□□□ -0.16
USP39-207ENST00000450066 CCDC85BQ15834 202 aaPredicted RBP14.03□□□□□ -0.16
USP39-207ENST00000450066 PLEKHS1Q5SXH7 462 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 VWA5B1Q5TIE3 1220 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.03□□□□□ -0.16
USP39-207ENST00000450066 PELI3Q8N2H9 469 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 HDDC3Q8N4P3 179 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 RASGEF1AQ8N9B8 481 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 NMUR2Q9GZQ4 415 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 EPHX3Q9H6B9 360 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 SAR1AQ9NR31 198 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 OARD1Q9Y530 152 aa14.03□□□□□ -0.16
USP39-207ENST00000450066 LRRK1Q38SD2 2015 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 A0A1W2PQF6 199 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 NCF1BA6NI72 391 aaPredicted RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 NCF1CA8MVU1 366 aaPredicted RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 K7ESM1 405 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 UBFD1O14562 309 aaKnown RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 RAD51BO15315 384 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 INPP4BO15327 924 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 NUAK1O60285 661 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 ATP5HO75947 161 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 KLF8O95600 359 aaPredicted RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 RPS17P08708 135 aaKnown RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 NCF1P14598 390 aaPredicted RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 GPR1P46091 355 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 MRPS21P82921 87 aaKnown RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 ACTN3Q08043 901 aaPredicted RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 ZNF648Q5T619 568 aaPredicted RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 ANKS6Q68DC2 871 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 RAET1GQ6H3X3 334 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 CACUL1Q86Y37 369 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 AFAP1L2Q8N4X5 818 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 MAPK15Q8TD08 544 aa14.02□□□□□ -0.16
USP39-207ENST00000450066 ZCCHC2Q9C0B9 1178 aaKnown RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 MKRN2Q9H000 416 aaKnown RBP14.02□□□□□ -0.16
USP39-207ENST00000450066 TXLNGQ9NUQ3 528 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms