RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TK2O00142 265 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 MRASO14807 208 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 GRID2O43424 1007 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 RAB10P61026 200 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 IMPG1Q17R60 797 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 Q5BKY6 102 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 EFL1Q7Z2Z2 1120 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 ZNF567Q8N184 647 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 CCDC185Q8N715 623 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 FAM83FQ8NEG4 500 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 ZFP42Q96MM3 310 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 HOPXQ9BPY8 73 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 MAGEB5Q9BZ81 275 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 COQ3Q9NZJ6 369 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 NDUFAF1Q9Y375 327 aa13.33□□□□□ -0.28
SYNGAP1-204ENST00000449372 PTPRDP23468 1912 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 TEX51A0A1B0GUA7 166 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 MFSD11O43934 449 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 SCO1O75880 301 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 HDCP19113 662 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 GTF2E2P29084 291 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 SHMT2P34897 504 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 SERPINH1P50454 418 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 ZNF33AQ06730 810 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 SMAD1Q15797 465 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 REP15Q6BDI9 236 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 ERAP2Q6P179 960 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 GDPD3Q7L5L3 318 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLC2A14Q8TDB8 520 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 BIRC7Q96CA5 298 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 NXNL1Q96CM4 212 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 NECTIN3Q9NQS3 549 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 NUP50Q9UKX7 468 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 CFL2Q9Y281 166 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 WBP11Q9Y2W2 641 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 MTF2Q9Y483 593 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 TANC1Q9C0D5 1861 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 GABARAPO95166 117 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 APOA1P02647 267 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 JUNP05412 331 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 IL7RP16871 459 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 GRK3P35626 688 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 CCR10P46092 362 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 ATP4BP51164 291 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLC7A2P52569 658 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 DNAJB13P59910 316 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 KRR1Q13601 381 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 TYSND1Q2T9J0 566 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 COLEC12Q5KU26 742 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 RBM48Q5RL73 367 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 METTL4Q8N3J2 472 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 ST6GAL2Q96JF0 529 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 C17orf62Q9BQA9 187 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 MED10Q9BTT4 135 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 CCDC90BQ9GZT6 254 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 MIOSQ9NXC5 875 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 TRPV2Q9Y5S1 764 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 G3V2L1 256 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 BEST1O76090 585 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 GP2P55259 537 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 POU4F1Q01851 419 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 DSC3Q14574 896 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 CBX2Q14781 532 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 AGKQ53H12 422 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 MRPL10Q7Z7H8 261 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 HORMAD1Q86X24 394 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 DEFB106AQ8N104 65 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 B3GALNT2Q8NCR0 500 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 DYNC2LI1Q8TCX1 351 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 STYXQ8WUJ0 223 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 ARNTL2Q8WYA1 636 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 GTF2H4Q92759 462 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 SNAPC3Q92966 411 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 NTAN1Q96AB6 310 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 ASPSCR1Q9BZE9 553 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 REXO4Q9GZR2 422 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 ST3GAL5Q9UNP4 418 aa13.32□□□□□ -0.28
SYNGAP1-204ENST00000449372 OR5K3A6NET4 321 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 AQP12BA6NM10 295 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 H0YAE9 185 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 M0QYT0 321 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 ANGPT2O15123 496 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 PDPK1O15530 556 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 CA12O43570 354 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 NOS1APO75052 506 aaPredicted RBP13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 ATXN1P54253 815 aaKnown RBP13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 RAD51Q06609 339 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 GALNT3Q14435 633 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 DPY19L1Q2PZI1 675 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 C5orf22Q49AR2 442 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 CLEC14AQ86T13 490 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 AQP12AQ8IXF9 295 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 LINC00469Q8N7U9 141 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 MCFD2Q8NI22 146 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 KCTD13Q8WZ19 329 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 HPS4Q9NQG7 708 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 TMEM181Q9P2C4 612 aa13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 TDRD15B5MCY1 1934 aaKnown RBP13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 F5H423 210 aaPredicted RBP13.31□□□□□ -0.28
SYNGAP1-204ENST00000449372 IFI30P13284 250 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms