RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 HK3P52790 923 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 ILF2Q12905 390 aaKnown RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 FASTKD3Q14CZ7 662 aaKnown RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 ELOCQ15369 112 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 SMAD1Q15797 465 aaKnown RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 DBN1Q16643 649 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 KYNUQ16719 465 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 ERCC6LQ2NKX8 1250 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 ALG11Q2TAA5 492 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 ZNF648Q5T619 568 aaPredicted RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 STEAP4Q687X5 459 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 ZNF470Q6ECI4 717 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 PTRHD1Q6GMV3 140 aaKnown RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 ZNF449Q6P9G9 518 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 LVRNQ6Q4G3 990 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 TMEM220Q6QAJ8 160 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 CAPN12Q6ZSI9 719 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 TRMT10CQ7L0Y3 403 aaKnown RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 DET1Q7L5Y6 550 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 LRRTM4Q86VH4 590 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 TMPRSS12Q86WS5 348 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 LRRC6Q86X45 466 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 TRAPPC5Q8IUR0 188 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 PIANPQ8IYJ0 282 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 CACTIN-AS1Q8N1I8 211 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 FSTL5Q8N475 847 aaPredicted RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 ANKK1Q8NFD2 765 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 LMX1AQ8TE12 382 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 OR1E3Q8WZA6 343 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 CERS2Q96G23 380 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 OR2M4Q96R27 311 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 TRIM56Q9BRZ2 755 aaKnown RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 CLPBQ9H078 707 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 CCDC68Q9H2F9 335 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 ANKZF1Q9H8Y5 726 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 FGF22Q9HCT0 170 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 EVA1BQ9NVM1 165 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 INTS10Q9NVR2 710 aaKnown RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 ZFATQ9P243 1243 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 TXNDC16Q9P2K2 825 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 APOBEC3BQ9UH17 382 aaKnown RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 KLK13Q9UKR3 277 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 TMPRSS11EQ9UL52 423 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 SUFUQ9UMX1 484 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 GPR34Q9UPC5 381 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 DNMT3AQ9Y6K1 912 aaPredicted RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 OAS3Q9Y6K5 1087 aaKnown RBP9.05□□□□□ -0.96
RFX3-207ENST00000449190 DGKBQ9Y6T7 804 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 ANKRD36A6QL64 1941 aa9.05□□□□□ -0.96
RFX3-207ENST00000449190 UBA6A0AVT1 1052 aaPredicted RBP9.04□□□□□ -0.96
RFX3-207ENST00000449190 KLHL33A6NCF5 533 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 H3BMM5 538 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 PRMT5O14744 637 aaPredicted RBP9.04□□□□□ -0.96
RFX3-207ENST00000449190 GPR39O43194 453 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 RFPL3O75679 317 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 FTH1P02794 183 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 PROS1P07225 676 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 ANXA6P08133 673 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 GSTM1P09488 218 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 PRSS56P0CW18 603 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 CKMT1AP12532 417 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 SSTR1P30872 391 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 ACADVLP49748 655 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 PMS2P54278 862 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 DAB2P98082 770 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 GSTM4Q03013 218 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 ILF3Q12906 894 aaKnown RBP eCLIP9.04□□□□□ -0.967e-7■□□□□ 10
RFX3-207ENST00000449190 DNAJC3Q13217 504 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 LRP8Q14114 963 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 PYCR3Q53H96 274 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 PRRT3Q5FWE3 981 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 WDR93Q6P2C0 686 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 PACS1Q6VY07 963 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 KIAA0408Q6ZU52 694 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 CYS1Q717R9 158 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 CHST15Q7LFX5 561 aaPredicted RBP9.04□□□□□ -0.96
RFX3-207ENST00000449190 TAF8Q7Z7C8 310 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 GKN2Q86XP6 184 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 CILP2Q8IUL8 1156 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 RELL1Q8IUW5 271 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 RASGEF1AQ8N9B8 481 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 ZNF548Q8NEK5 533 aaPredicted RBP9.04□□□□□ -0.96
RFX3-207ENST00000449190 GATA6Q92908 595 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 GLMNQ92990 594 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 SGF29Q96ES7 293 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 SCARF2Q96GP6 870 aaPredicted RBP9.04□□□□□ -0.96
RFX3-207ENST00000449190 APOLD1Q96LR9 279 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 CCDC77Q9BR77 488 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 GSDMCQ9BYG8 508 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 LRRC4CQ9HCJ2 640 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 MRPL40Q9NQ50 206 aaKnown RBP9.04□□□□□ -0.96
RFX3-207ENST00000449190 TRNAU1APQ9NX07 287 aaKnown RBP9.04□□□□□ -0.96
RFX3-207ENST00000449190 IL1RAPL1Q9NZN1 696 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 NCKIPSDQ9NZQ3 722 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 MARCH4Q9P2E8 410 aaPredicted RBP9.04□□□□□ -0.96
RFX3-207ENST00000449190 GNPTGQ9UJJ9 305 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 FBXO5Q9UKT4 447 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 PCDHB1Q9Y5F3 818 aa9.04□□□□□ -0.96
RFX3-207ENST00000449190 TMEM131Q92545 1883 aa9.03□□□□□ -0.96
RFX3-207ENST00000449190 IGLV3-16A0A075B6K0 115 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 221.1 ms