RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RAB15P59190 212 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 RPL26P61254 145 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 GUCY2DQ02846 1103 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 PRPSAP1Q14558 356 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 KCNJ11Q14654 390 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 DCAF12Q5T6F0 453 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 RNASEH2BQ5TBB1 312 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 NKAIN2Q5VXU1 208 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 LRRC66Q68CR7 880 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 DOK6Q6PKX4 331 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 GALNT13Q8IUC8 556 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 KLHDC8BQ8IXV7 354 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 IL22RA1Q8N6P7 574 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 OR10G6Q8NH81 332 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 PATE1Q8WXA2 126 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 SH3KBP1Q96B97 665 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 PWWP2AQ96N64 755 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 TEFMQ96QE5 360 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 TRIB3Q96RU7 358 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC38A3Q99624 504 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC12A9Q9BXP2 914 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 TDRD1Q9BXT4 1180 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC25A18Q9H1K4 315 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 ADNPQ9H2P0 1102 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC39A1Q9NY26 324 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 GRHL1Q9NZI5 618 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 RPL26L1Q9UNX3 145 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 TMEM98Q9Y2Y6 226 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 TENM4Q6N022 2769 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 BHMG1C9JSJ3 638 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 PPFIA2O75334 1257 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 ANXA9O76027 345 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 ASMTLO95671 621 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 FAM87AP0C7U9 286 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 WT1P19544 449 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 ADRA1AP35348 466 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 UGT1A3P35503 534 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 LMAN1P49257 510 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 STC1P52823 247 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 ITGA8P53708 1063 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 MPP3Q13368 585 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 RFLNAQ6ZTI6 216 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 ZNF534Q76KX8 674 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 SFRP1Q8N474 314 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 LPCAT1Q8NF37 534 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 PTCD2Q8WV60 388 aaKnown RBP13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 ART4Q93070 314 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 SCAMP4Q969E2 229 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 LRRC45Q96CN5 670 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 SNF8Q96H20 258 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 COX14Q96I36 57 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 CATSPER2Q96P56 530 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 EFHD1Q9BUP0 239 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 STN1Q9H668 368 aaKnown RBP13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 RMI1Q9H9A7 625 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 VPS18Q9P253 973 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 ZNHIT2Q9UHR6 403 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 CD84Q9UIB8 345 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 UTP11Q9Y3A2 253 aaKnown RBP13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 PLEKHM1Q9Y4G2 1056 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 B3GALT1Q9Y5Z6 326 aa13.57□□□□□ -0.24
PDLIM2-213ENST00000448520 RGSL1A5PLK6 1076 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 TERTO14746 1132 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 DUX1O43812 170 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 SEC31AO94979 1220 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 AP2A1O95782 977 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 PIRTP0C851 137 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 SLC2A4P14672 509 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 ARSDP51689 593 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 CYP4F2P78329 520 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 ERCC6LQ2NKX8 1250 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 SIRPB2Q5JXA9 342 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 BORAQ6PGQ7 559 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 WDR74Q6RFH5 385 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 ZDHHC24Q6UX98 284 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 CACNA2D3Q8IZS8 1091 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 NAT8LQ8N9F0 302 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 OR52K1Q8NGK4 314 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 CCHCR1Q8TD31 782 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 JPH3Q8WXH2 748 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 LYSMD1Q96S90 227 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 TBL1YQ9BQ87 522 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 ZPBPQ9BS86 351 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 RIOK2Q9BVS4 552 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 FSD1LQ9BXM9 530 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 RAB17Q9H0T7 212 aa13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 SARS2Q9NP81 518 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 AAR2Q9Y312 384 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-213ENST00000448520 BOD1L1Q8NFC6 3051 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 TRBV23OR9-2A0A075B6M9 112 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 LOC285095A0A1B0GVY8 99 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 OR5K4A6NMS3 321 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 EFCAB7A8K855 629 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 PYCARD-AS1I3L0S3 204 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 DNAJC6O75061 913 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 AVILO75366 819 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 BANF1O75531 89 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 NDST3O95803 873 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 TPH1P17752 444 aa13.55□□□□□ -0.24
PDLIM2-213ENST00000448520 TPSB2P20231 275 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms