RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ARL6IP5O75915 188 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 UCHL1P09936 223 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ACO1P21399 889 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 PRMT2P55345 433 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 GRIK2Q13002 908 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 NAE1Q13564 534 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 MLC1Q15049 377 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 STXBP5Q5T5C0 1151 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 LIPMQ5VYY2 423 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 G2E3Q7L622 706 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 LYSMD3Q7Z3D4 306 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TMC3Q7Z5M5 1100 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ADGRD2Q7Z7M1 963 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TSPAN33Q86UF1 283 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 METTL16Q86W50 562 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 LPAR1Q92633 364 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 MTFMTQ96DP5 389 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TMEM39BQ9GZU3 492 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 KIAA1683Q9H0B3 1180 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 NANSQ9NR45 359 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 SH2B3Q9UQQ2 575 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 PCDHB12Q9Y5F1 795 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF821O75541 412 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 RGS9O75916 674 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ZBTB7AO95365 584 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 APBA3O96018 575 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ACVR2AP27037 513 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ANTXR2P58335 489 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 UBQLNLQ8IYU4 475 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ACTL9Q8TC94 416 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 OR2B2Q9GZK3 357 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF70Q9UC06 446 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ARHGEF17Q96PE2 2063 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 SCO1O75880 301 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PNPP00491 289 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 RBMXP38159 391 aaKnown RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 SNRPD1P62314 119 aaKnown RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PPP3CAQ08209 521 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 TMED4Q7Z7H5 227 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 SAMD14Q8IZD0 417 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 FTMTQ8N4E7 242 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 TBL1YQ9BQ87 522 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ERVK-5Q9HDB9 667 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 B3GAT2Q9NPZ5 323 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PSMD9O00233 223 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 UPP2O95045 317 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ITGAVP06756 1048 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 MAGEB1P43366 347 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 C12orf40Q86WS4 652 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 OR2AP1Q8NGE2 309 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CHAC2Q8WUX2 184 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CCDC74BQ96LY2 380 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 RAB21Q9UL25 225 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 KIF1BO60333 1816 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CAPN14A8MX76 684 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L15C9J2P7 530 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L13C9JLJ4 530 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L11C9JVI0 530 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L18D6R9N7 530 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L22D6RA61 530 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L17D6RBQ6 530 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L19D6RCP7 530 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L20D6RJB6 530 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CACNB4O00305 520 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ADAM10O14672 748 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PAK4O96013 591 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 UGT2B4P06133 528 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CYP2F1P24903 491 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CLCN5P51795 746 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L24Q0WX57 530 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 NFIXQ14938 502 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 TKFCQ3LXA3 575 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 C9orf64Q5T6V5 341 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CIAPIN1Q6FI81 312 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L6PQ6QN14 398 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 KDELC1Q6UW63 502 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 LRRC57Q8N9N7 239 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 OR5T2Q8NGG2 359 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 BRD7Q9NPI1 651 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PDE10AQ9Y233 779 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 MYH1P12882 1939 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 MYH2Q9UKX2 1941 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 MYH4Q9Y623 1939 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 H0YGN5 161 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 RARAP10276 462 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 CTNNB1P35222 781 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 AFF3P51826 1226 aaKnown RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PSMA6P60900 246 aaKnown RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 LRP8Q14114 963 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 UAP1L1Q3KQV9 507 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 RNF180Q86T96 592 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 OR2T12Q8NG77 320 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 UBA3Q8TBC4 463 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PLEKHO2Q8TD55 490 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 TAAR8Q969N4 342 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 C17orf62Q9BQA9 187 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 GDAP2Q9NXN4 497 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 PDP1Q9P0J1 537 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-202ENST00000448238 KANSL3Q9P2N6 904 aa8.85□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF726A6NNF4 738 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms