RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 NUCB2P80303 420 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 BIRC3Q13489 604 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 CYB5D1Q6P9G0 228 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 BHLHB9Q6PI77 547 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 FAM198BQ6UWH4 519 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 PRSS42Q7Z5A4 293 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 TTC7BQ86TV6 843 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 SLC38A9Q8NBW4 561 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 CA5BP1Q8WTZ4 195 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 MR1Q95460 341 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 MAP6Q96JE9 813 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 IP6K3Q96PC2 410 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 CYP3A43Q9HB55 503 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 WASH6PQ9NQA3 447 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 STMN3Q9NZ72 180 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 IL17CQ9P0M4 197 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 ABI3Q9P2A4 366 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 SEC14L3Q9UDX4 400 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 CNOT6Q9ULM6 557 aaKnown RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 A0A0D9SEW6 157 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 OR14I1A6ND48 311 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 SEC16AO15027 2179 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 BUB1BO60566 1050 aaPredicted RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 CLDN11O75508 207 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 EML2O95834 649 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 IGHEP01854 428 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 APOEP02649 317 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 UGT2B4P06133 528 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 TPOP07202 933 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 PDIA4P13667 645 aaKnown RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 NELFEP18615 380 aaKnown RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 HOXA5P20719 270 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 UGT1A4P22310 534 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 ADCY8P40145 1251 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 KIR2DL2P43627 348 aaPredicted RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 SEPHS1P49903 392 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 RNF4P78317 190 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 NKX6-1P78426 367 aaPredicted RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 PDE1BQ01064 536 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 GUCY1B3Q02153 619 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 HHEXQ03014 270 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 RBPJQ06330 500 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 DMPKQ09013 629 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 BBS9Q3SYG4 887 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 ZACNQ401N2 412 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 CEP128Q6ZU80 1094 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 TAC4Q86UU9 113 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 RAB43Q86YS6 212 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 SIX6OS1Q8N1H7 587 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 PELI3Q8N2H9 469 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 SLC4A11Q8NBS3 891 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 ISG20Q96AZ6 181 aaKnown RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 CNDP1Q96KN2 507 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 KLHL32Q96NJ5 620 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 DMRTA2Q96SC8 542 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 FRMD8Q9BZ67 464 aaPredicted RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 TM6SF1Q9BZW5 370 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 PRDM14Q9GZV8 571 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 APOBEC3GQ9HC16 384 aaKnown RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 RASSF1Q9NS23 344 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 LRFN1Q9P244 771 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 SEMA5BQ9P283 1151 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 RARRES3Q9UL19 164 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 NOL7Q9UMY1 257 aaKnown RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 PRKDCP78527 4128 aaKnown RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 CXorf51AA0A1B0GTR3 108 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 LILRA5A6NI73 299 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 LRRIQ3A6PVS8 624 aaPredicted RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 SOCS6O14544 535 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 ADAM10O14672 748 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TGFB1I1O43294 461 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 HTRA2O43464 458 aaPredicted RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 KLF7O75840 302 aaPredicted RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 WISP2O76076 250 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TOXO94900 526 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 PRAMEF1O95521 474 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 MYCLP1P12525 358 aaPredicted RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 UNGP13051 313 aaPredicted RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 FOLR1P15328 257 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 RORAP35398 523 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 ACTR1BP42025 376 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SUOXP51687 545 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 CDH4P55283 916 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SLC8A3P57103 927 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 ACTR1AP61163 376 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 ARF5P84085 180 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 KRTAP1-1Q07627 177 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SLC20A2Q08357 652 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 MYBPHQ13203 477 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TUBB3Q13509 450 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 AUHQ13825 339 aaKnown RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 SSPNQ14714 243 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SLC14A2Q15849 920 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 PLEKHS1Q5SXH7 462 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SETD3Q86TU7 594 aaPredicted RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 CDC20BQ86Y33 519 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 DSELQ8IZU8 1212 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 CPSF7Q8N684 471 aaKnown RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 CATSPER1Q8NEC5 780 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms