RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 FCGR1AP12314 374 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 SERPINB5P36952 375 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 RGS7P49802 495 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 GABARAPL2P60520 117 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 YWHAZP63104 245 aaKnown RBP12.95□□□□□ -0.34
DDX56-206ENST00000446987 SLC10A2Q12908 348 aaPredicted RBP12.95□□□□□ -0.34
DDX56-206ENST00000446987 TARDBPQ13148 414 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDX56-206ENST00000446987 PIGHQ14442 188 aaPredicted RBP12.95□□□□□ -0.34
DDX56-206ENST00000446987 TAF12Q16514 161 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 N4BP2L1Q5TBK1 243 aaPredicted RBP12.95□□□□□ -0.34
DDX56-206ENST00000446987 HACD2Q6Y1H2 254 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 UNC5AQ6ZN44 842 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 PRSS48Q7RTY5 328 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 MON1AQ86VX9 555 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 ACTL9Q8TC94 416 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 KCTD13Q8WZ19 329 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 OVCA2Q8WZ82 227 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 NDRG1Q92597 394 aaKnown RBP12.95□□□□□ -0.34
DDX56-206ENST00000446987 KXD1Q9BQD3 176 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 CENPOQ9BU64 300 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 C20orf96Q9NUD7 363 aaPredicted RBP12.95□□□□□ -0.34
DDX56-206ENST00000446987 COMMD8Q9NX08 183 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 VTI1BQ9UEU0 232 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 NUP50Q9UKX7 468 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 CCL26Q9Y258 94 aa12.95□□□□□ -0.34
DDX56-206ENST00000446987 CUL9Q8IWT3 2517 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 A6NL46 340 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 AQP12BA6NM10 295 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 CXorf49A8MYA2 514 aaPredicted RBP12.94□□□□□ -0.34
DDX56-206ENST00000446987 CCRL2O00421 344 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 UPK1BO75841 260 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 TRAPPC2P0DI81 140 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 TRAPPC2BP0DI82 140 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 WEE1P30291 646 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 VIPR2P41587 438 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 ZNF135P52742 658 aaPredicted RBP12.94□□□□□ -0.34
DDX56-206ENST00000446987 GDF10P55107 478 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 PSME3P61289 254 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 ADIGQ0VDE8 80 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 MAPRE2Q15555 327 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 SLC9B1Q4ZJI4 515 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 VWA5B1Q5TIE3 1220 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 AGAP6Q5VW22 663 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 RSBN1Q5VWQ0 802 aaPredicted RBP12.94□□□□□ -0.34
DDX56-206ENST00000446987 ZNF544Q6NX49 715 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 FAM122CQ6P4D5 195 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 VITQ6UXI7 678 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 AQP12AQ8IXF9 295 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 FAM109AQ8N4B1 249 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 CBR4Q8N4T8 237 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 MCUQ8NE86 351 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 RHOXF1Q8NHV9 184 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 ZFP90Q8TF47 636 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 CLEC4CQ8WTT0 213 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 SMARCD2Q92925 531 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 USP13Q92995 863 aaPredicted RBP12.94□□□□□ -0.34
DDX56-206ENST00000446987 AGAP4Q96P64 663 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 ULBP1Q9BZM6 244 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 TRIM15Q9C019 465 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 DNAI2Q9GZS0 605 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 CD300AQ9UGN4 299 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 MOSPD1Q9UJG1 213 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 PACSIN3Q9UKS6 424 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 VWA7Q9Y334 891 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 PCDHGA7Q9Y5G6 932 aa12.94□□□□□ -0.34
DDX56-206ENST00000446987 C3orf70A6NLC5 250 aaPredicted RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 PI4K2BG5E9Z4 385 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 CFLARO15519 480 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 NARSO43776 548 aaKnown RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 NADKO95544 446 aaPredicted RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 TOP3BO95985 862 aaKnown RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 BMP4P12644 408 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 CKMT2P17540 419 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 CDH5P33151 784 aaPredicted RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 TKTL1P51854 596 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 PLA2G16P53816 162 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 STX5Q13190 355 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 SAMD4BQ5PRF9 694 aaKnown RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 SLC9A4Q6AI14 798 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 PM20D1Q6GTS8 502 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 CRTC3Q6UUV7 619 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 SLC16A12Q6ZSM3 486 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 SLCO6A1Q86UG4 719 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 C10orf107Q8IVU9 208 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 CMTM8Q8IZV2 173 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 ARL14EPQ8N8R7 260 aaPredicted RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 OR2T34Q8NGX1 318 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 OR2T3Q8NH03 318 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 LPGAT1Q92604 370 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 MRPS31Q92665 395 aaKnown RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 ERLEC1Q96DZ1 483 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 CENPNQ96H22 339 aaPredicted RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 SLC39A13Q96H72 371 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 PIWIL1Q96J94 861 aaKnown RBP12.93□□□□□ -0.34
DDX56-206ENST00000446987 CYP2S1Q96SQ9 504 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 LHPPQ9H008 270 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 FBXO44Q9H4M3 255 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 CCSER2Q9H7U1 834 aa12.93□□□□□ -0.34
DDX56-206ENST00000446987 AGPAT4Q9NRZ5 378 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms