RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CAMK1Q14012 370 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 MBLAC2Q68D91 279 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 RHBDF2Q6PJF5 856 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 TMEM220Q6QAJ8 160 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ABRAXAS1Q6UWZ7 409 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 HIPK1Q86Z02 1210 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 IZUMO1Q8IYV9 350 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 C11orf65Q8NCR3 313 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 RHOBTB2Q9BYZ6 727 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 WDR6Q9NNW5 1121 aaKnown RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ABCB8Q9NUT2 735 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 CDH7Q9ULB5 785 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 APBB3O95704 486 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ELOAQ14241 798 aaKnown RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 OASLQ15646 514 aaKnown RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 MINDY4Q4G0A6 757 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 TCEAL6Q6IPX3 200 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 DNAJC14Q6Y2X3 702 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 CROCCP3Q8IVE0 287 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 PLD5Q8N7P1 536 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ZDHHC12Q96GR4 267 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 USP29Q9HBJ7 922 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 IFT80Q9P2H3 777 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 GMPPBQ9Y5P6 360 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 RIIAD1A6NNX1 92 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ADAMDEC1O15204 470 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 PRDX6P30041 224 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 LCP2Q13094 533 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 DPYSL2Q16555 572 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF730Q6ZMV8 503 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ILDR1Q86SU0 546 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 SERPINA9Q86WD7 417 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF641Q96N77 438 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 FCRL5Q96RD9 977 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF347Q96SE7 839 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 WRAP53Q9BUR4 548 aaKnown RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 SMOC2Q9H3U7 446 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 COMMD9Q9P000 198 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 XPR1Q9UBH6 696 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 TNFRSF10BO14763 440 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 GPR17Q13304 367 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 C4orf32Q8N8J7 132 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 RTKNQ9BST9 563 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 GATBO75879 557 aaKnown RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 AP2A2O94973 939 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SERPINA1P01009 418 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 ADSSP30520 456 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 GRK6P43250 576 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 NRLP54845 237 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 RAB2AP61019 212 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 NAE1Q13564 534 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 KCNC3Q14003 757 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 EIF4HQ15056 248 aaKnown RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 NDUFA5Q16718 116 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 CCDC92Q53HC0 331 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SPIN4Q56A73 249 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TCHHL1Q5QJ38 904 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 BROXQ5VW32 411 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 RASGRP3Q8IV61 690 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SLC44A1Q8WWI5 657 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 THRSPQ92748 146 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 DNASE1L2Q92874 299 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TNFRSF25Q93038 417 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 HMCESQ96FZ2 354 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 HIC2Q96JB3 615 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 PELOQ9BRX2 385 aaKnown RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 NUAK2Q9H093 628 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 PHRF1Q9P1Y6 1649 aaKnown RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 C2CD4BA6NLJ0 364 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TISP43B9A030 160 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 FFAR3O14843 346 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 GPR42O15529 346 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 NPHS1O60500 1241 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 HOXB2P14652 356 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 FBXO43Q4G163 708 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF311Q5JNZ3 666 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 CDCA2Q69YH5 1023 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 CHCHD4Q8N4Q1 142 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 FAM13CQ8NE31 585 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 OR52K2Q8NGK3 314 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 ING5Q8WYH8 240 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 RGMAQ96B86 450 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SSR3Q9UNL2 185 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TFR2Q9UP52 801 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SAMHD1Q9Y3Z3 626 aaKnown RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 DOT1LQ8TEK3 1739 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 MYO10Q9HD67 2058 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 PEX11AO75192 247 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 PSME3P61289 254 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 MYBPC3Q14896 1274 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 ELOCQ15369 112 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 ZYG11AQ6WRX3 759 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 USP6NLQ92738 828 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 SLC38A4Q969I6 547 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 NDNQ99608 321 aa8.45□□□□□ -1.06
PTPN3-204ENST00000446349 PAIP2BQ9ULR5 123 aaKnown RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 RBM7Q9Y580 266 aaKnown RBP8.45□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF487B1APH4 448 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms