RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ANGPT4Q9Y264 503 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 G3V2L1 256 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 CXCR6O00574 342 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 CYP4F3Q08477 520 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 TRAF7Q6Q0C0 670 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 EIF3MQ7L2H7 374 aaKnown RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 R3HCC1LQ7Z5L2 792 aaKnown RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 GRIN3AQ8TCU5 1115 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 C2orf15Q8WU43 125 aaKnown RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 NLNQ9BYT8 704 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 DERL2Q9GZP9 239 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 POLR3BQ9NW08 1133 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 KPNA3O00505 521 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 TBX18O95935 607 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 ZNF37AP17032 561 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 STC1P52823 247 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 SIM2Q14190 667 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 TRIM40Q6P9F5 258 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 NAPRTQ6XQN6 538 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 C11orf74Q86VG3 221 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 NRG4Q8WWG1 115 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 MIOSQ9NXC5 875 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 EVLQ9UI08 416 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 MYH9P35579 1960 aaKnown RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 EFCAB10A6NFE3 127 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 MYL12BO14950 172 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 SEPT4O43236 478 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 ZNF12P17014 697 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 CCDC142Q17RM4 750 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 RSBN1Q5VWQ0 802 aaPredicted RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 CYP20A1Q6UW02 462 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 TRAPPC5Q8IUR0 188 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 TMEM130Q8N3G9 435 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 LIX1Q8N485 282 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 ARNTL2Q8WYA1 636 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 C8orf48Q96LL4 319 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 TMEM248Q9NWD8 314 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 RGS10O43665 173 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 NIPSNAP2O75323 286 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 RPN2P04844 631 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 ATXN8OSP0DMR3 200 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 TLR1Q15399 786 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 ASZ1Q8WWH4 475 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 TIFAQ96CG3 184 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 C1orf74Q96LT6 269 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 NOL6Q9H6R4 1146 aaKnown RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 FBRSL1Q9HCM7 1045 aaKnown RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 CLN6Q9NWW5 311 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 ZNF510Q9Y2H8 683 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 H0YJX3 145 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 HTRA2O43464 458 aaPredicted RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 GALNT18Q6P9A2 607 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 RPS27LQ71UM5 84 aaKnown RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 PHF10Q8WUB8 498 aaKnown RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 GATA6Q92908 595 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 PEX13Q92968 403 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 PPP1R14BQ96C90 147 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 MTERF3Q96E29 417 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 IL12RB2Q99665 862 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 CGREF1Q99674 301 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 TSEN34Q9BSV6 310 aaKnown RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 DNAJC25-GNG10A0A024R161 153 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 GPR32O75388 356 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 DBTP11182 482 aaKnown RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 MYL12AP19105 171 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 GMPRP36959 345 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 CDH15P55291 814 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 CPTPQ5TA50 214 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 NPWQ8N729 165 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 SORT1Q99523 831 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 MEAF6Q9HAF1 191 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 GALPQ9UBC7 116 aa16.44■□□□□ 0.22
TCOF1-206ENST00000445265 CRNNQ9UBG3 495 aaPredicted RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 CDV3Q9UKY7 258 aaKnown RBP16.44■□□□□ 0.22
TCOF1-206ENST00000445265 ASLP04424 464 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 TYW3Q6IPR3 259 aaKnown RBP16.43■□□□□ 0.22
TCOF1-206ENST00000445265 CEP97Q8IW35 865 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 PSMA8Q8TAA3 256 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 ZNF778Q96MU6 729 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 VPS35Q96QK1 796 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 ABCB10Q9NRK6 738 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 SH3GLB1Q9Y371 365 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 LAMB2P55268 1798 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 RNASEH2AO75792 299 aaKnown RBP16.43■□□□□ 0.22
TCOF1-206ENST00000445265 TRBC1P01850 177 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 ASMTP46597 345 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 SERINC3Q13530 473 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 PIGGQ5H8A4 983 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 CCDC149Q6ZUS6 474 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 GPR156Q8NFN8 814 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 IMP4Q96G21 291 aaKnown RBP16.43■□□□□ 0.22
TCOF1-206ENST00000445265 MRGPRX2Q96LB1 330 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 PDP1Q9P0J1 537 aaPredicted RBP16.43■□□□□ 0.22
TCOF1-206ENST00000445265 KCTD3Q9Y597 815 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 FFAR2O15552 330 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 ZBTB11O95625 1053 aaPredicted RBP16.43■□□□□ 0.22
TCOF1-206ENST00000445265 ZNF423Q2M1K9 1284 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 MS4A13Q5J8X5 152 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms