RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 NSMCE3Q96MG7 304 aa10.49□□□□□ -0.73
TOP3B-210ENST00000444502 FAM126AQ9BYI3 521 aaPredicted RBP10.49□□□□□ -0.73
TOP3B-210ENST00000444502 IMP3Q9NV31 184 aaKnown RBP10.49□□□□□ -0.73
TOP3B-210ENST00000444502 GLYATL1P3A0A0U1RQE8 302 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 MGAT4DA6NG13 374 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 MAN1A2O60476 641 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 FGF19O95750 216 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 ABCB1P08183 1280 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 KCNA5P22460 613 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 GRK3P35626 688 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 NDST2P52849 883 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 NR1H2P55055 460 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 ERVK-21P61565 698 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 IRF8Q02556 426 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 TRAF2Q12933 501 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 SMUG1Q53HV7 270 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 KLHDC9Q8NEP7 349 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 CCDC3Q9BQI4 270 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 RTKNQ9BST9 563 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 C1QTNF7Q9BXJ2 289 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 MCOLN1Q9GZU1 580 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 KCNK13Q9HB14 408 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 HCFC1R1Q9NWW0 138 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 ZCWPW2A0A1B0GU75 182 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 PRMT5O14744 637 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 AURKAO14965 403 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 AZIN1O14977 448 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 TGM5O43548 720 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 EIF2S1P05198 315 aaKnown RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 CAPN1P07384 714 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 GRIA3P42263 894 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 SLC7A2P52569 658 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 TBCELQ5QJ74 424 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 DHFR2Q86XF0 187 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 TSPAN14Q8NG11 270 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 OMA1Q96E52 524 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 ASPSCR1Q9BZE9 553 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 ELAC1Q9H777 363 aaKnown RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 TMEM30AQ9NV96 361 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 HSFX1Q9UBD0 423 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 LTBP1Q14766 1721 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 LOXHD1Q8IVV2 1947 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 H3BQ06 376 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 RPP40O75818 363 aaKnown RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 CPSF4O95639 269 aaKnown RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 ENO2P09104 434 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 DGKAP23743 735 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 FRG1Q14331 258 aaKnown RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 CMPK2Q5EBM0 449 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 SIRPB2Q5JXA9 342 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 CACHD1Q5VU97 1274 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 STEAP4Q687X5 459 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 IL27RAQ6UWB1 636 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 TMEM173Q86WV6 379 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 CLYBLQ8N0X4 340 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 CLEC4FQ8N1N0 589 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 BPIFB1Q8TDL5 484 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 SORCS1Q8WY21 1168 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 IGSF8Q969P0 613 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 KIFC1Q9BW19 673 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 OSBPL6Q9BZF3 934 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 NKX2-4Q9H2Z4 354 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 EIF3LQ9Y262 564 aaKnown RBP10.48□□□□□ -0.73
TOP3B-210ENST00000444502 SCN1AP35498 2009 aa10.48□□□□□ -0.73
TOP3B-210ENST00000444502 C5orf58C9J3I9 102 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 LEFTY2O00292 366 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 MAFKO60675 156 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 SEC22BO75396 215 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 EPCAMP16422 314 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 DDX5P17844 614 aaKnown RBP10.47□□□□□ -0.73
TOP3B-210ENST00000444502 LBPP18428 481 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 TCEA1P23193 301 aaKnown RBP10.47□□□□□ -0.73
TOP3B-210ENST00000444502 CST5P28325 142 aaPredicted RBP10.47□□□□□ -0.73
TOP3B-210ENST00000444502 PCSK6P29122 969 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 BMPR1AP36894 532 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 OCA2Q04671 838 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 ANKDD1AQ495B1 522 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 ZNF614Q8N883 585 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 CCDC90BQ9GZT6 254 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 SPTBN2O15020 2390 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 GVINP1Q7Z2Y8 2422 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 ZNF840PA6NDX5 716 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 NPEPPSL1A6NEC2 478 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 K7EPI3 171 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 TSPAN9O75954 239 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 POP4O95707 220 aaKnown RBP10.47□□□□□ -0.73
TOP3B-210ENST00000444502 KRT6AP02538 564 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 KRT6BP04259 564 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 KRT6CP48668 564 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 STK19P49842 368 aaPredicted RBP10.47□□□□□ -0.73
TOP3B-210ENST00000444502 ACTR3P61158 418 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 ECT2LQ008S8 904 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 SCAPQ12770 1279 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 RAB30Q15771 203 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 ATP6AP1LQ52LC2 224 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 PIK3R6Q5UE93 754 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 MRPL10Q7Z7H8 261 aaKnown RBP10.47□□□□□ -0.73
TOP3B-210ENST00000444502 SPNS2Q8IVW8 549 aa10.47□□□□□ -0.73
TOP3B-210ENST00000444502 CEP97Q8IW35 865 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms