RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 NXPE1Q8N323 547 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 AVL9Q8NBF6 648 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 STYXQ8WUJ0 223 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 NCSTNQ92542 709 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 TMEM159Q96B96 161 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 CXorf40BQ96DE9 158 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 COPS8Q99627 209 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 KCNF1Q9H3M0 494 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 WDR70Q9NW82 654 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 AKAP7Q9P0M2 348 aaPredicted RBP13.49□□□□□ -0.25
LTBR-202ENST00000440421 DRG1Q9Y295 367 aaKnown RBP13.49□□□□□ -0.25
LTBR-202ENST00000440421 ZKSCAN5Q9Y2L8 839 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 DNMT3AQ9Y6K1 912 aaPredicted RBP13.49□□□□□ -0.25
LTBR-202ENST00000440421 AGAP14A8MT82 685 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 KLK10O43240 276 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 KCNJ13O60928 360 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 SUN1O94901 812 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 THRAP10827 490 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 RALBP11234 206 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 CCL4P13236 92 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 TYRP1P17643 537 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 MLLT3P42568 568 aaPredicted RBP13.48□□□□□ -0.25
LTBR-202ENST00000440421 EPHA4P54764 986 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 TLE3Q04726 772 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 DMPKQ09013 629 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 GPR33Q49SQ1 333 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 AGAP9Q5VTM2 703 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 DRICH1Q6PGQ1 229 aaPredicted RBP13.48□□□□□ -0.25
LTBR-202ENST00000440421 WASH2PQ6VEQ5 465 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 TMEM26Q6ZUK4 368 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 PDZD3Q86UT5 571 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 SERPINA9Q86WD7 417 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 USP7Q93009 1102 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 CDKN2AIPNLQ96HQ2 116 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 MS4A14Q96JA4 679 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 ZNF514Q96K75 400 aaPredicted RBP13.48□□□□□ -0.25
LTBR-202ENST00000440421 DPYSL5Q9BPU6 564 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 C19orf43Q9BQ61 176 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 WASH6PQ9NQA3 447 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 TRMT1Q9NXH9 659 aaKnown RBP13.48□□□□□ -0.25
LTBR-202ENST00000440421 KLHL3Q9UH77 587 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 JRKLQ9Y4A0 524 aa13.48□□□□□ -0.25
LTBR-202ENST00000440421 MGAT4DA6NG13 374 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 MROH6A6NGR9 719 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 OR51F1A6NGY5 319 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 LILRA5A6NI73 299 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 CFAP99D6REC4 459 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 H7C0S8 307 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 HGSO14964 777 aaPredicted RBP13.47□□□□□ -0.25
LTBR-202ENST00000440421 SGTAO43765 313 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 PRAMEF10O60809 474 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 POLBP06746 335 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 AMD1P17707 334 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 MSNP26038 577 aaKnown RBP13.47□□□□□ -0.25
LTBR-202ENST00000440421 ACRV1P26436 265 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 CSTF2P33240 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
LTBR-202ENST00000440421 ARSDP51689 593 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 TERF1P54274 439 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 BASP1P80723 227 aaKnown RBP13.47□□□□□ -0.25
LTBR-202ENST00000440421 CACNG1Q06432 222 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 TRA2AQ13595 282 aaKnown RBP eCLIP13.47□□□□□ -0.25
LTBR-202ENST00000440421 GPR18Q14330 331 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 SKIDA1Q1XH10 827 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 BCL7AQ4VC05 210 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 WDR74Q6RFH5 385 aaPredicted RBP13.47□□□□□ -0.25
LTBR-202ENST00000440421 SLC35F6Q8N357 371 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 PRELID2Q8N945 189 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 GPR150Q8NGU9 434 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 OR2L2Q8NH16 312 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 JPH3Q8WXH2 748 aaPredicted RBP13.47□□□□□ -0.25
LTBR-202ENST00000440421 ANP32BQ92688 251 aaKnown RBP13.47□□□□□ -0.25
LTBR-202ENST00000440421 WWP1Q9H0M0 922 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 CASS4Q9NQ75 786 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 POT1Q9NUX5 634 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 IMP3Q9NV31 184 aaKnown RBP13.47□□□□□ -0.25
LTBR-202ENST00000440421 ZDHHC3Q9NYG2 299 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
LTBR-202ENST00000440421 OGFRQ9NZT2 677 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 PCDHGA7Q9Y5G6 932 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 CFAP20Q9Y6A4 193 aaKnown RBP13.47□□□□□ -0.25
LTBR-202ENST00000440421 BPTFQ12830 3046 aa13.47□□□□□ -0.25
LTBR-202ENST00000440421 TRBV5-4A0A0C4DH59 114 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 HEATR9A2RTY3 570 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 CCDC162PA2VCL2 907 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 ZSCAN12O43309 604 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 UBXN7O94888 489 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 FGF3P11487 239 aaPredicted RBP13.46□□□□□ -0.25
LTBR-202ENST00000440421 ATP1B2P14415 290 aaPredicted RBP13.46□□□□□ -0.25
LTBR-202ENST00000440421 TRIP13Q15645 432 aaPredicted RBP13.46□□□□□ -0.25
LTBR-202ENST00000440421 RPE65Q16518 533 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 DBN1Q16643 649 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 METRNLQ641Q3 311 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 DUS1LQ6P1R4 473 aaKnown RBP13.46□□□□□ -0.25
LTBR-202ENST00000440421 FAM129CQ86XR2 697 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 PIANPQ8IYJ0 282 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 CFAP206Q8IYR0 622 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 LILRA3Q8N6C8 439 aaPredicted RBP13.46□□□□□ -0.25
LTBR-202ENST00000440421 AGBL5Q8NDL9 886 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 HEXDCQ8WVB3 486 aa13.46□□□□□ -0.25
LTBR-202ENST00000440421 AP1M1Q9BXS5 423 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms