RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PLCL1Q15111 1095 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 ANKS6Q68DC2 871 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 RANBP10Q6VN20 620 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 RBM12BQ8IXT5 1001 aaKnown RBP19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 IL22RA1Q8N6P7 574 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 PMEPA1Q969W9 287 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 ZNF514Q96K75 400 aaPredicted RBP19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 TGM7Q96PF1 710 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 ZNF624Q9P2J8 865 aaPredicted RBP19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 GUCA1BQ9UMX6 200 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 PCDHGA3Q9Y5H0 932 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 CFAP99D6REC4 459 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 DDX3YO15523 660 aaKnown RBP19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 KRT86O43790 486 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 HADHAP40939 763 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 GFERP55789 205 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 SRSF6Q13247 344 aaKnown RBP19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 ABRAXAS1Q6UWZ7 409 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 WASH2PQ6VEQ5 465 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 C11orf96Q7Z7L8 435 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 TAB3Q8N5C8 712 aaPredicted RBP19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 RNF10Q8N5U6 811 aaKnown RBP19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 SNRNP27Q8WVK2 155 aaKnown RBP19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 ULK4Q96C45 1275 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 SGF29Q96ES7 293 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 ALS2CR12Q96Q35 445 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 TEFMQ96QE5 360 aaKnown RBP19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 CTRCQ99895 268 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 LRRC40Q9H9A6 602 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 WASH6PQ9NQA3 447 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 PDP2Q9P2J9 529 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 PSMD13Q9UNM6 376 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 SSUH2Q9Y2M2 353 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 KCTD3Q9Y597 815 aa19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 MN1Q10571 1320 aaPredicted RBP19.49■□□□□ 0.71
SHROOM1-204ENST00000440118 GAPDHSO14556 408 aaPredicted RBP19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 EFSO43281 561 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 BRAFP15056 766 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 CAPZBP47756 277 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 GPR18Q14330 331 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 NFE2L1Q14494 772 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 PARP6Q2NL67 630 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 IRGCQ6NXR0 463 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 CEACAM20Q6UY09 585 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 BEND7Q8N7W2 519 aaPredicted RBP19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 OR13C4Q8NGS5 318 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 HES6Q96HZ4 224 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 ARHGAP9Q9BRR9 750 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 TMEM121Q9BTD3 319 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 IMP3Q9NV31 184 aaKnown RBP19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 DNMT3AQ9Y6K1 912 aaPredicted RBP19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 SLC30A1Q9Y6M5 507 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 ATMQ13315 3056 aa19.48■□□□□ 0.71
SHROOM1-204ENST00000440118 KALRNO60229 2985 aa19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 CAPN5O15484 640 aaPredicted RBP19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 SLC35G4P0C7Q5 338 aa19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 LMAN1P49257 510 aa19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 ZNF140P52738 457 aaPredicted RBP19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 FOXM1Q08050 763 aa19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 DMPKQ09013 629 aa19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 KLF1Q13351 362 aaPredicted RBP19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 CLCA4Q14CN2 919 aa19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 ARHGAP22Q7Z5H3 698 aa19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 SLC40A1Q9NP59 571 aa19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 WDR37Q9Y2I8 494 aa19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 R3HDM2Q9Y2K5 976 aaKnown RBP19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 PCDHGA4Q9Y5G9 962 aa19.47■□□□□ 0.71
SHROOM1-204ENST00000440118 PIEZO2Q9H5I5 2752 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 PRR19A6NJB7 356 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 PSMD3O43242 534 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 GAS8O95995 478 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 MC4RP32245 332 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 CA5AP35218 305 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 SEPHS1P49903 392 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 GDF10P55107 478 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 MC2RQ01718 297 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 POU6F1Q14863 301 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 ZRANB3Q5FWF4 1079 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 KLHL35Q6PF15 583 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 SNX20Q7Z614 316 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 DTX1Q86Y01 620 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 CACNA2D3Q8IZS8 1091 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 ATG4AQ8WYN0 398 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 RSC1A1Q92681 617 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 KIAA1143Q96AT1 154 aaPredicted RBP19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 ZDHHC12Q96GR4 267 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 C9orf72Q96LT7 481 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 COPS8Q99627 209 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 ZPBPQ9BS86 351 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 FAM96AQ9H5X1 160 aa19.46■□□□□ 0.71
SHROOM1-204ENST00000440118 PIKFYVEQ9Y2I7 2098 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 TCRBV7S2A1N4TA0A589 114 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 KLHL33A6NCF5 533 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 MGAT4DA6NG13 374 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 E7EVH7 732 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 CCL22O00626 93 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 POLR1CO15160 346 aaPredicted RBP19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 RAD1O60671 282 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 METTL18O95568 372 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms