RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 TCAF1Q9Y4C2 921 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CHD5Q8TDI0 1954 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CHD6Q8TD26 2715 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 EML5Q05BV3 1969 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 MYLKQ15746 1914 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 A0A088AWK7 358 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 RGSL1A5PLK6 1076 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 SOBPA7XYQ1 873 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 KHNYNO15037 678 aaKnown RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 SLC7A4O43246 635 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 ENTPD5O75356 428 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 TMCC1O94876 653 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 C2P06681 752 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 ENO1P06733 434 aaKnown RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 TDGF1P13385 188 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 RHOQP17081 205 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 CTPS1P17812 591 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 ENGP17813 658 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 NFKB1P19838 968 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 CALRP27797 417 aaKnown RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 RGRP47804 291 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 LEPRP48357 1165 aaKnown RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 RENBPP51606 427 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 INHBCP55103 352 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 YBEYP58557 167 aaPredicted RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 RAB10P61026 200 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 ACVR1Q04771 509 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 PCSK7Q16549 785 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 C5orf22Q49AR2 442 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF776Q68DI1 518 aaPredicted RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 ALG1LQ6GMV1 187 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 CRTC1Q6UUV9 634 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 RIPOR1Q6ZS17 1223 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 FBXW8Q8N3Y1 598 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 DNAAF3Q8N9W5 541 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 OR2A12Q8NGT7 310 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 GPR150Q8NGU9 434 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 OR8D1Q8WZ84 308 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 THOC1Q96FV9 657 aaKnown RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 MSANTD3Q96H12 275 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF778Q96MU6 729 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 FCRL3Q96P31 734 aaPredicted RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 FAM129BQ96TA1 746 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 MECRQ9BV79 373 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 ACE2Q9BYF1 805 aaPredicted RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 MRPL46Q9H2W6 279 aaKnown RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 EPB41L1Q9H4G0 881 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 SYNDIG1Q9H7V2 258 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 TMEM248Q9NWD8 314 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 PIH1D1Q9NWS0 290 aaKnown RBP4.71□□□□□ -1.65
EDEM3-203ENST00000439962 SLC7A8Q9UHI5 535 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 CD84Q9UIB8 345 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 FBXO10Q9UK96 956 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 NCKAP1Q9Y2A7 1128 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 ACOT9Q9Y305 439 aa4.71□□□□□ -1.65
EDEM3-203ENST00000439962 RP1P56715 2156 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 SPAARA0A1B0GVQ0 90 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 CCDC78A2IDD5 438 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 PRR5-ARHGAP8B1AHC4 643 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 CASC3O15234 703 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 FFAR2O15552 330 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 MAFKO60675 156 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 MMP20O60882 483 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 RETP07949 1114 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 COX4I1P13073 169 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 TCF3P15923 654 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 STMN1P16949 149 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ATP5F1P24539 256 aaPredicted RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 PPARGP37231 505 aaPredicted RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 GRIA1P42261 906 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ARCN1P48444 511 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 MAPKAPK2P49137 400 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ARHGAP8P85298 464 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 PPARDQ03181 441 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 SLC10A7Q0GE19 358 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 THOC5Q13769 683 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 PARP15Q460N3 678 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 COQ5Q5HYK3 327 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 CES4AQ5XG92 561 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 PMS2CLQ68D20 193 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 CAPRIN2Q6IMN6 1127 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 RETSATQ6NUM9 610 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 KLC3Q6P597 504 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 C22orf39Q6P5X5 142 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 RANBP10Q6VN20 620 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 DHDDSQ86SQ9 333 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ARHGAP12Q8IWW6 846 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 PGAM4Q8N0Y7 254 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 MINDY1Q8N5J2 469 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 TSPEARQ8WU66 669 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ZFAND2BQ8WV99 257 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 GATA6Q92908 595 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 AGAP3Q96P47 875 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 PANX3Q96QZ0 392 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 NUSAP1Q9BXS6 441 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 C20orf27Q9GZN8 174 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 Q9H521 79 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 GAREM1Q9H706 876 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 NT5MQ9NPB1 228 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 TCF7L2Q9NQB0 619 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms