RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 DNMT3BQ9UBC3 853 aaKnown RBP3.61□□□□□ -1.83
HMGB1P12-201ENST00000438594 XPR1Q9UBH6 696 aa3.61□□□□□ -1.83
HMGB1P12-201ENST00000438594 MTRF1LQ9UGC7 380 aaKnown RBP3.61□□□□□ -1.83
HMGB1P12-201ENST00000438594 KIAA1257Q9ULG3 409 aa3.61□□□□□ -1.83
HMGB1P12-201ENST00000438594 SUFUQ9UMX1 484 aa3.61□□□□□ -1.83
HMGB1P12-201ENST00000438594 CDC14AQ9UNH5 594 aa3.61□□□□□ -1.83
HMGB1P12-201ENST00000438594 COPG1Q9Y678 874 aaKnown RBP3.61□□□□□ -1.83
HMGB1P12-201ENST00000438594 LOC105369274A0A096LPK9 316 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 C15orf38-AP3S2A0A0A6YYH1 394 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 LOC102723532A0A0G2JNH3 316 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 TRBV2A0A0J9YWF9 115 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 TTC26A0AVF1 554 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SLC15A5A6NIM6 579 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 AGAP5A6NIR3 686 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 AQP7P3A6NL99 342 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 TARM1B6A8C7 271 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 K7ERQ8 282 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 M0QYT0 321 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 LGALS8O00214 317 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 POLRMTO00411 1230 aaKnown RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 PER2O15055 1255 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ZSCAN9O15535 394 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 RRP8O43159 456 aaKnown RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 PLRG1O43660 514 aaKnown RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 MITFO75030 526 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 MED24O75448 989 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ECI2O75521 394 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SEC31AO94979 1220 aaKnown RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SPDEFO95238 335 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 GNA14O95837 355 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 IGLV2-14P01704 120 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 LCATP04180 440 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SERPING1P05155 500 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 GNAI3P08754 354 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 IQCF3P0C7M6 154 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SPATA31D3P0C874 917 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ITGAMP11215 1152 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 RALBP11234 206 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 KRT3P12035 628 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 PKMP14618 531 aaKnown RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 GCFC2P16383 781 aaKnown RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 U2AF2P26368 475 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 PON1P27169 355 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 HOXA13P31271 388 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 CAPGP40121 348 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 MAGEA1P43355 309 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 CDKN1BP46527 198 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SLC11A1P49279 550 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SMSP52788 366 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 BLVRAP53004 296 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 GNAI1P63096 354 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 IRX1P78414 480 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 MRPS15P82914 257 aaKnown RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 MXRA7P84157 204 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 MEF2AQ02078 507 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 MZT1Q08AG7 82 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 PDZK1IP1Q13113 114 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SRSF5Q13243 272 aaKnown RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 CSHL1Q14406 222 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 LARS2Q15031 903 aaKnown RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 BEAN1Q3B7T3 259 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 BCL7AQ4VC05 210 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 PLA1AQ53H76 456 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ZNF789Q5FWF6 425 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 C6orf163Q5TEZ5 329 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 PRAMEF8Q5VWM4 474 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 DAB2IPQ5VWQ8 1189 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 TMEM81Q6P7N7 255 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 BRAT1Q6PJG6 821 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 DEGS2Q6QHC5 323 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 GLDNQ6ZMI3 551 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 CFAP77Q6ZQR2 320 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SPATA31D4Q6ZUB0 917 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 TOM1L2Q6ZVM7 507 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SEM1Q6ZVN7 128 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 GPRIN1Q7Z2K8 1008 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SLC46A3Q7Z3Q1 461 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SPATA21Q7Z572 469 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ABI3BPQ7Z7G0 1075 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 CENPVQ7Z7K6 275 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ADAMTSL2Q86TH1 951 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SLC15A3Q8IY34 581 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 EFCAB13Q8IY85 973 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SRRM1Q8IYB3 904 aaKnown RBP3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 OR4N4Q8N0Y3 316 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 TCAIMQ8N3R3 496 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ARFGAP2Q8N6H7 521 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ZNF565Q8N9K5 539 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 RNF169Q8NCN4 708 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 OR7D4Q8NG98 312 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 OR8J1Q8NGP2 316 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 FAM76AQ8TAV0 307 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 SCARB1Q8WTV0 552 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ASB10Q8WXI3 467 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 CDKL2Q92772 493 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 APBB2Q92870 758 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ARSGQ96EG1 525 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 ELMOD3Q96FG2 381 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 DTD2Q96FN9 168 aa3.6□□□□□ -1.83
HMGB1P12-201ENST00000438594 NSMCE2Q96MF7 247 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms