RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ZNF7P17097 686 aaPredicted RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 ZNF8P17098 575 aaPredicted RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 TYRP1P17643 537 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 IDSP22304 550 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 KDELR1P24390 212 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 CASP14P31944 242 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 STAT5AP42229 794 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 MAP2K3P46734 347 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 SEPHS1P49903 392 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 ARSEP51690 589 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 CLCNKAP51800 687 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 TAS2R40P59535 323 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 SNRPNP63162 240 aaKnown RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 DYNLT1P63172 113 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 ZBTB17Q13105 803 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 PLCL1Q15111 1095 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 SLC18A3Q16572 532 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 LACTB2Q53H82 288 aaPredicted RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 ARSJQ5FYB0 599 aaPredicted RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 ZDHHC20Q5W0Z9 365 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 IRGCQ6NXR0 463 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 C6orf15Q6UXA7 325 aaPredicted RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 TMEM26Q6ZUK4 368 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 BZW1Q7L1Q6 419 aaKnown RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 PQLC3Q8N755 202 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 BMPERQ8N8U9 685 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 RAPGEF5Q92565 580 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 C9orf72Q96LT7 481 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 PLEKHG4BQ96PX9 1271 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 FERMT1Q9BQL6 677 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 TIMM29Q9BSF4 260 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 TBC1D10AQ9BXI6 508 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 CEP41Q9BYV8 373 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 SLC25A51Q9H1U9 297 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 UCK1Q9HA47 277 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 MAGEE1Q9HCI5 957 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 ZNF71Q9NQZ8 489 aaPredicted RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 POT1Q9NUX5 634 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 NFKBIL1Q9UBC1 381 aaPredicted RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 KCND3Q9UK17 655 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 CNOT6Q9ULM6 557 aaKnown RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 TMEM184BQ9Y519 407 aaPredicted RBP7.64□□□□□ -1.19
VPS50-204ENST00000438395 KCTD3Q9Y597 815 aa7.64□□□□□ -1.19
VPS50-204ENST00000438395 LOC101059948A0A1B0GTJ6 334 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 A0A1W2PNR3 127 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 CDK2AP1O14519 115 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 MTSS1O43312 755 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 KATNA1O75449 491 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 MT-ND3P03897 115 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 MMP2P08253 660 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 TMEM253P0C7T8 217 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 BMP4P12644 408 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 XRCC1P18887 633 aaPredicted RBP7.63□□□□□ -1.19
VPS50-204ENST00000438395 RPL10P27635 214 aaKnown RBP7.63□□□□□ -1.19
VPS50-204ENST00000438395 DLSTP36957 453 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 PBX1P40424 430 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 CASRP41180 1078 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 CAPZBP47756 277 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 ARSDP51689 593 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 GFERP55789 205 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 UBE2IP63279 158 aaKnown RBP7.63□□□□□ -1.19
VPS50-204ENST00000438395 SLC10A2Q12908 348 aaPredicted RBP7.63□□□□□ -1.19
VPS50-204ENST00000438395 TFDP2Q14188 446 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 MAP7Q14244 749 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 IL11RAQ14626 422 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 SLC14A2Q15849 920 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 PPP2R5EQ16537 467 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 SKIDA1Q1XH10 827 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 ZNF648Q5T619 568 aaPredicted RBP7.63□□□□□ -1.19
VPS50-204ENST00000438395 CCDC181Q5TID7 509 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 CACHD1Q5VU97 1274 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 ARMC6Q6NXE6 501 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 ADGRG6Q86SQ4 1221 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 VSIG1Q86XK7 387 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 CPNE8Q86YQ8 564 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 RHOT2Q8IXI1 618 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 RHOT1Q8IXI2 618 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 PLD5Q8N7P1 536 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 CNTD1Q8N815 330 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 GALNT6Q8NCL4 622 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 GPR26Q8NDV2 337 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 OR8K1Q8NGG5 319 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 IMP4Q96G21 291 aaKnown RBP7.63□□□□□ -1.19
VPS50-204ENST00000438395 ELMO2Q96JJ3 720 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 CCDC42Q96M95 316 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 OR6C1Q96RD1 312 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 WDR24Q96S15 920 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 FSD1LQ9BXM9 530 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 PACSIN1Q9BY11 444 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 XPO4Q9C0E2 1151 aaKnown RBP7.63□□□□□ -1.19
VPS50-204ENST00000438395 TRABDQ9H4I3 376 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 GLOD4Q9HC38 313 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 APMAPQ9HDC9 416 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 PDE7BQ9NP56 450 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 DDX56Q9NY93 547 aaKnown RBP7.63□□□□□ -1.19
VPS50-204ENST00000438395 KLHL8Q9P2G9 620 aaPredicted RBP7.63□□□□□ -1.19
VPS50-204ENST00000438395 TRIM10Q9UDY6 481 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 POLHQ9Y253 713 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 PKP3Q9Y446 797 aa7.63□□□□□ -1.19
VPS50-204ENST00000438395 SPTBN1Q01082 2364 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms