RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 C11orf96Q7Z7L8 435 aa11.3□□□□□ -0.6
SNHG3-202ENST00000437681 AMZ2Q86W34 360 aa11.3□□□□□ -0.6
SNHG3-202ENST00000437681 NRROSQ86YC3 692 aa11.3□□□□□ -0.6
SNHG3-202ENST00000437681 SLC25A45Q8N413 288 aa11.3□□□□□ -0.6
SNHG3-202ENST00000437681 RASGEF1AQ8N9B8 481 aa11.3□□□□□ -0.6
SNHG3-202ENST00000437681 ZNF669Q96BR6 464 aaPredicted RBP11.3□□□□□ -0.6
SNHG3-202ENST00000437681 CLPBQ9H078 707 aa11.3□□□□□ -0.6
SNHG3-202ENST00000437681 STN1Q9H668 368 aaKnown RBP11.3□□□□□ -0.6
SNHG3-202ENST00000437681 POPDC3Q9HBV1 291 aa11.3□□□□□ -0.6
SNHG3-202ENST00000437681 EPB41L5Q9HCM4 733 aa11.3□□□□□ -0.6
SNHG3-202ENST00000437681 CYP4F12Q9HCS2 524 aa11.3□□□□□ -0.6
SNHG3-202ENST00000437681 FTSJ1Q9UET6 329 aa11.3□□□□□ -0.6
SNHG3-202ENST00000437681 ZFC3H1O60293 1989 aaKnown RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 FAM221BA6H8Z2 402 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 TMX2-CTNND1H3BSU7 103 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 MAP2K7O14733 419 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 KDM1AO60341 852 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 LDOC1O95751 146 aaPredicted RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 IDSP22304 550 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 CSE1LP55060 971 aaKnown RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 METRNLQ641Q3 311 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 UGT3A1Q6NUS8 523 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 TRMT10CQ7L0Y3 403 aaKnown RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 CARFQ8N187 725 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 DCLK2Q8N568 766 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 NOA1Q8NC60 698 aaKnown RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 PYROXD1Q8WU10 500 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 CDKL2Q92772 493 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 CERS2Q96G23 380 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 PDXPQ96GD0 296 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 OR2AG1Q9H205 316 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 SARS2Q9NP81 518 aaKnown RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 RAPGEFL1Q9UHV5 662 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 SGTAO43765 313 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 NDUFS3O75489 264 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 ASMTLO95671 621 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 CKMT2P17540 419 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 ELK3P41970 407 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 GNPDA1P46926 289 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 B4GALNT1Q00973 533 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 PDIA2Q13087 525 aaKnown RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 GBX1Q14549 363 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 TMED2Q15363 201 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 TCEAL6Q6IPX3 200 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 WDR93Q6P2C0 686 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 CASC4Q6P4E1 433 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 KCNMB4Q86W47 210 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 AGGF1Q8N302 714 aaeCLIP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 OR6P1Q8NGX9 317 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 LMX1AQ8TE12 382 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 LPGAT1Q92604 370 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 TCEAL3Q969E4 200 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 FCRL3Q96P31 734 aaPredicted RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 MYOCQ99972 504 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 POT1Q9NUX5 634 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 CHCHD3Q9NX63 227 aaKnown RBP11.29□□□□□ -0.6
SNHG3-202ENST00000437681 SLC2A6Q9UGQ3 507 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 KLF15Q9UIH9 416 aa11.29□□□□□ -0.6
SNHG3-202ENST00000437681 TRIOO75962 3097 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 LILRA5A6NI73 299 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 AKT1P31749 480 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 SKIV2L2P42285 1042 aaKnown RBP11.28□□□□□ -0.6
SNHG3-202ENST00000437681 HLTFQ14527 1009 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNHG3-202ENST00000437681 BBS9Q3SYG4 887 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 C14orf28Q4W4Y0 310 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 PSAPL1Q6NUJ1 521 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 TMEM220Q6QAJ8 160 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 UNC5AQ6ZN44 842 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 TAS2R42Q7RTR8 314 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 SLC9B2Q86UD5 537 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 MFSD3Q96ES6 412 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 FMO2Q99518 471 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 PARD6BQ9BYG5 372 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 TAAR2Q9P1P5 351 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 APOBEC2Q9Y235 224 aaKnown RBP11.28□□□□□ -0.6
SNHG3-202ENST00000437681 PCDHGA4Q9Y5G9 962 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 MAD1L1Q9Y6D9 718 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 INPP4BO15327 924 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 YY2O15391 372 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 FKBP9O95302 570 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 S1PR4O95977 384 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 PMLP29590 882 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 MAGEA4P43358 317 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 MSS51Q4VC12 460 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.28□□□□□ -0.6
SNHG3-202ENST00000437681 MARK2Q7KZI7 788 aaKnown RBP11.28□□□□□ -0.6
SNHG3-202ENST00000437681 ALYREFQ86V81 257 aaKnown RBP11.28□□□□□ -0.6
SNHG3-202ENST00000437681 ZNF547Q8IVP9 402 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 FBXO36Q8NEA4 188 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 FBXO25Q8TCJ0 367 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 KCNJ9Q92806 393 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 TSACCQ96A04 125 aaPredicted RBP11.28□□□□□ -0.6
SNHG3-202ENST00000437681 MIEF2Q96C03 454 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 RAB33BQ9H082 229 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 DPH5Q9H2P9 285 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 MVB12BQ9H7P6 319 aa11.28□□□□□ -0.6
SNHG3-202ENST00000437681 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.27□□□□□ -0.6
SNHG3-202ENST00000437681 EME2A4GXA9 379 aaPredicted RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms