RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	SLC36A4	Q6YBV0	504 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	PLEKHM3	Q6ZWE6	761 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	ERN2	Q76MJ5	926 aa	Known RBP	6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	KDELC2	Q7Z4H8	507 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	NANOGNB	Q7Z5D8	188 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	FAM124A	Q86V42	546 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	WDR5B	Q86VZ2	330 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	LONP2	Q86WA8	852 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CREG2	Q8IUH2	290 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	NRSN1	Q8IZ57	195 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	ZNF567	Q8N184	647 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	PGBD5	Q8N414	524 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	TMCO5A	Q8N6Q1	288 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CNTD1	Q8N815	330 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	PRELID2	Q8N945	189 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	MFSD2A	Q8NA29	543 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	GOLM1	Q8NBJ4	401 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	MDGA1	Q8NFP4	955 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	IPMK	Q8NFU5	416 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	B4GALNT2	Q8NHY0	566 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	UTP15	Q8TED0	518 aa	Known RBP	6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CCT6B	Q92526	530 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	RAB7B	Q96AH8	199 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CLIP3	Q96DZ5	547 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	GIMAP5	Q96F15	307 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	RADIL	Q96JH8	1075 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	KLHL32	Q96NJ5	620 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	FCRL5	Q96RD9	977 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	LRFN3	Q9BTN0	628 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	FSD1L	Q9BXM9	530 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CPEB1	Q9BZB8	566 aa	Known RBP	6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	FOXP3	Q9BZS1	431 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	MKRN2	Q9H000	416 aa	Known RBP	6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	BTBD1	Q9H0C5	482 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	SLC25A51	Q9H1U9	297 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	SLC6A17	Q9H1V8	727 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	GBA3	Q9H227	469 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	PABPC3	Q9H361	631 aa	Known RBP	6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	NOD2	Q9HC29	1040 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	ITM2C	Q9NQX7	267 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	PRMT8	Q9NR22	394 aa	Predicted RBP	6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	DDX18	Q9NVP1	670 aa	Known RBP	6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	FBXL12	Q9NXK8	326 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	PAK5	Q9P286	719 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	MTRF1L	Q9UGC7	380 aa	Known RBP	6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	EBF1	Q9UH73	591 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	FAM153A	Q9UHL3	310 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CDC23	Q9UJX2	597 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	AAR2	Q9Y312	384 aa	Known RBP	6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	NUP205	Q92621	2012 aa		6.16	□□□□□ -1.42
ECHDC1-208	ENST00000436638	NYNRIN	Q9P2P1	1898 aa	Known RBP	6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CTAGE15	A4D2H0	777 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	FAM47DP	A6NHR8	397 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	C16orf96	A6NNT2	1141 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638		K7ESF4	209 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	UBXN8	O00124	270 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	AP3B1	O00203	1094 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CACNB4	O00305	520 aa	Predicted RBP	6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	EBAG9	O00559	213 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	PMPCB	O75439	489 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	ZNF821	O75541	412 aa	Predicted RBP	6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	GCAT	O75600	419 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	USP1	O94782	785 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CEACAM5	P06731	702 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CTSL	P07711	333 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	PDHA1	P08559	390 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	SP9	P0CG40	484 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CTAGE8	P0CG41	777 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	ZNF3	P17036	446 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CR2	P20023	1033 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	MCM3	P25205	808 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	PSMB4	P28070	264 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CD6	P30203	668 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CNR2	P34972	360 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	HADHA	P40939	763 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	FNTB	P49356	437 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	VPS41	P49754	854 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	SUOX	P51687	545 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CDK18	Q07002	472 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	C2orf54	Q08AI8	447 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	NIPAL4	Q0D2K0	466 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	ELP6	Q0PNE2	266 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	NFE2L1	Q14494	772 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	TCEA2	Q15560	299 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CYP1B1	Q16678	543 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	NAPEPLD	Q6IQ20	393 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	C11orf88	Q6PI97	169 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	ZC3H14	Q6PJT7	736 aa	Known RBP	6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	DBX2	Q6ZNG2	339 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	SYDE1	Q6ZW31	735 aa	Predicted RBP	6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	USP30	Q70CQ3	517 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	USP45	Q70EL2	814 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	FAM214B	Q7L5A3	538 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	LPCAT2	Q7L5N7	544 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	TAOK1	Q7L7X3	1001 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	TTC7B	Q86TV6	843 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CTAGE6	Q86UF2	777 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CAMK1D	Q8IU85	385 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	CTAGE4	Q8IX94	777 aa		6.15	□□□□□ -1.42
ECHDC1-208	ENST00000436638	FAM9C	Q8IZT9	166 aa		6.15	□□□□□ -1.42

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