RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 NFKB2Q00653 900 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 XRCC4Q13426 336 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 SEPT7Q16181 437 aaKnown RBP14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 PLA2G4EQ3MJ16 856 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 PRSS42Q7Z5A4 293 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 STAMBPL1Q96FJ0 436 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 HES6Q96HZ4 224 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 TEKT5Q96M29 485 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 TGM7Q96PF1 710 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 RAB33BQ9H082 229 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 APMAPQ9HDC9 416 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 ARFGAP3Q9NP61 516 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 SIDT1Q9NXL6 827 aaKnown RBP14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 EPHA6Q9UF33 1036 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 KCND3Q9UK17 655 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 CAPN6Q9Y6Q1 641 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 RPS6KL1Q9Y6S9 549 aa14.63□□□□□ -0.07
RPUSD3-208ENST00000433972 KLHL33A6NCF5 533 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 H7C0C1 242 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 PMPCBO75439 489 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 STK10O94804 968 aaKnown RBP14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 MT-CYBP00156 380 aaPredicted RBP14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 CCNYL3P0C7X3 344 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 TYRP1P17643 537 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 MSNP26038 577 aaKnown RBP14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 SPAM1P38567 509 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 SLC19A1P41440 591 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 ATP5OP48047 213 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 TLE1Q04724 770 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 TMEM115Q12893 351 aaPredicted RBP14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 ITGA9Q13797 1035 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 LDLRAP1Q5SW96 308 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 SEL1L2Q5TEA6 688 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 C6orf15Q6UXA7 325 aaPredicted RBP14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 TIPARPQ7Z3E1 657 aaKnown RBP14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 ZC3H18Q86VM9 953 aaKnown RBP14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 RASGRP3Q8IV61 690 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 SPATA22Q8NHS9 363 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 SEC14L1Q92503 715 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 ALG3Q92685 438 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 COL26A1Q96A83 441 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 SLC40A1Q9NP59 571 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 SAE1Q9UBE0 346 aaPredicted RBP14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 SLC23A2Q9UGH3 650 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 PACSIN2Q9UNF0 486 aaPredicted RBP14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 PKP3Q9Y446 797 aa14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 DNMT3AQ9Y6K1 912 aaPredicted RBP14.62□□□□□ -0.07
RPUSD3-208ENST00000433972 BSNQ9UPA5 3926 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 NKX2-8O15522 239 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 PECAM1P16284 738 aaPredicted RBP14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 HLA-DPA1P20036 260 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 PTPN3P26045 913 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 RPL10P27635 214 aaKnown RBP14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 GFERP55789 205 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 PRKD1Q15139 912 aaPredicted RBP14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 ATP13A5Q4VNC0 1218 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 ZNF648Q5T619 568 aaPredicted RBP14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 CACHD1Q5VU97 1274 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 AMZ2Q86W34 360 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 BPHLQ86WA6 291 aaPredicted RBP14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 PPP1R3BQ86XI6 285 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 CDKL3Q8IVW4 592 aaPredicted RBP14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 UNC5BQ8IZJ1 945 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 UBXN4Q92575 508 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 PDLIM2Q96JY6 352 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 ZNF514Q96K75 400 aaPredicted RBP14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 OR6C1Q96RD1 312 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 PDE7BQ9NP56 450 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 OGFRQ9NZT2 677 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 SCHIP1Q9P0W5 487 aaPredicted RBP14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 KLHL8Q9P2G9 620 aaPredicted RBP14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 ZNF624Q9P2J8 865 aaPredicted RBP14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 SDK2Q58EX2 2172 aa14.61□□□□□ -0.07
RPUSD3-208ENST00000433972 SPTA1P02549 2419 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 LOC285095A0A1B0GVY8 99 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 PRR19A6NJB7 356 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 DDX3YO15523 660 aaKnown RBP14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 MTX2O75431 263 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 RECKO95980 971 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 DLSTP36957 453 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 CASRP41180 1078 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 SEPHS1P49903 392 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 WNT3AP56704 352 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 EIF3EP60228 445 aaKnown RBP14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 ADCY2Q08462 1091 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 DMPKQ09013 629 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 MPP3Q13368 585 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 GPR18Q14330 331 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 DEFB109BQ30KR1 87 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 IRGCQ6NXR0 463 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 C16orf46Q6P387 395 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 DARS2Q6PI48 645 aaKnown RBP14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 PID1Q7Z2X4 250 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 GLT6D1Q7Z4J2 308 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 PTRH1Q86Y79 214 aaKnown RBP14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 ZNF547Q8IVP9 402 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 BEND7Q8N7W2 519 aaPredicted RBP14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 ACTL9Q8TC94 416 aa14.6□□□□□ -0.07
RPUSD3-208ENST00000433972 KLHL6Q8WZ60 621 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms