RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 NAGSQ8N159 534 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 CHCHD4Q8N4Q1 142 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 Q8N9G6 341 aaPredicted RBP15.26■□□□□ 0.03
TREX1-201ENST00000433541 GPR156Q8NFN8 814 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 GABPB2Q8TAK5 448 aaPredicted RBP15.26■□□□□ 0.03
TREX1-201ENST00000433541 CXorf40BQ96DE9 158 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 CCDC97Q96F63 343 aaPredicted RBP15.26■□□□□ 0.03
TREX1-201ENST00000433541 SIGLEC10Q96LC7 697 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 PWWP2AQ96N64 755 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 CCDC3Q9BQI4 270 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 NAT9Q9BTE0 207 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 LRRC1Q9BTT6 524 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 TSSK1BQ9BXA7 367 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 PPANQ9NQ55 473 aaKnown RBP15.26■□□□□ 0.03
TREX1-201ENST00000433541 TOR4AQ9NXH8 423 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 WHRNQ9P202 907 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 MARCH4Q9P2E8 410 aaPredicted RBP15.26■□□□□ 0.03
TREX1-201ENST00000433541 PSMD13Q9UNM6 376 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 DNMT3AQ9Y6K1 912 aaPredicted RBP15.26■□□□□ 0.03
TREX1-201ENST00000433541 UNC13CQ8NB66 2214 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 LY6G6EA0A0G2JKS1 128 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 MGAT4DA6NG13 374 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 HYAL3O43820 417 aaPredicted RBP15.25■□□□□ 0.03
TREX1-201ENST00000433541 OR1I1O60431 355 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 KCNJ13O60928 360 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 USP1O94782 785 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 AP2A2O94973 939 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 GP1BAP07359 652 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 SLC35G4P0C7Q5 338 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 GLB1P16278 677 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 ALDH4A1P30038 563 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 ELK3P41970 407 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 PLTPP55058 493 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 EIF3BP55884 814 aaKnown RBP15.25■□□□□ 0.03
TREX1-201ENST00000433541 E2F1Q01094 437 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 HHEXQ03014 270 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 BOP1Q14137 746 aaKnown RBP15.25■□□□□ 0.03
TREX1-201ENST00000433541 SEMA3AQ14563 771 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 BRD3Q15059 726 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 PERM1Q5SV97 790 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 ZNF470Q6ECI4 717 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 CENPUQ71F23 418 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 SLC9B2Q86UD5 537 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 CCDC25Q86WR0 208 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 ANKMY2Q8IV38 441 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 CFAP206Q8IYR0 622 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 ARL14Q8N4G2 192 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 OR2L2Q8NH16 312 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 SLC37A2Q8TED4 501 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 EBNA1BP2Q99848 306 aaKnown RBP15.25■□□□□ 0.03
TREX1-201ENST00000433541 CCM2Q9BSQ5 444 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 ZC3H7BQ9UGR2 993 aaKnown RBP15.25■□□□□ 0.03
TREX1-201ENST00000433541 RNF215Q9Y6U7 377 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 U3KQA8 63 aa15.25■□□□□ 0.03
TREX1-201ENST00000433541 IGLV3-16A0A075B6K0 115 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 KIR2DS5A0A0G2JLQ3 304 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 A0A0G2JNG1 304 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 KLHL33A6NCF5 533 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 OR5K4A6NMS3 321 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 KIR2DS3K7RE56 304 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 NUDT21O43809 227 aaKnown RBP15.24■□□□□ 0.03
TREX1-201ENST00000433541 TTC4O95801 387 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 EML2O95834 649 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 VIPP01282 170 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 ITGB6P18564 788 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 MAPK9P45984 424 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 CLCNKAP51800 687 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 GUCY2DQ02846 1103 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 CAV1Q03135 178 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 SPIDRQ14159 915 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 KRT33BQ14525 404 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 HLTFQ14527 1009 aaKnown RBP eCLIP15.24■□□□□ 0.03
TREX1-201ENST00000433541 CRYMQ14894 314 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 KIR2DS5Q14953 304 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 AMZ1Q400G9 498 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 MSS51Q4VC12 460 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 RNF187Q5TA31 235 aaPredicted RBP15.24■□□□□ 0.03
TREX1-201ENST00000433541 DUPD1Q68J44 220 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 NEPROQ6NW34 567 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 OGFOD3Q6PK18 319 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 PACS1Q6VY07 963 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 C11orf96Q7Z7L8 435 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 KCNMB4Q86W47 210 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 CCNJLQ8IV13 435 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 ZBED8Q8IZ13 594 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 AGGF1Q8N302 714 aaeCLIP15.24■□□□□ 0.03
TREX1-201ENST00000433541 GALNT15Q8N3T1 639 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 AVL9Q8NBF6 648 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 HM13Q8TCT9 377 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 CALML6Q8TD86 181 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 ADAMTS14Q8WXS8 1223 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 ELMO1Q92556 727 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 LRRC39Q96DD0 335 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 AHCYL2Q96HN2 611 aaKnown RBP15.24■□□□□ 0.03
TREX1-201ENST00000433541 SGSM3Q96HU1 749 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 FCRL3Q96P31 734 aaPredicted RBP15.24■□□□□ 0.03
TREX1-201ENST00000433541 SLC38A3Q99624 504 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 FAM167BQ9BTA0 163 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 CARD6Q9BX69 1037 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 IMP3Q9NV31 184 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms