RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SLC6A6P31641 620 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 EIF2S3P41091 472 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 APOBEC1P41238 236 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 NRIP1P48552 1158 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 AMPHP49418 695 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 LIG4P49917 911 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 ZNF75DP51815 510 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 SNRPEP62304 92 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 EEF1A2Q05639 463 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 GTF2H2Q13888 395 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 ZRSR1Q15695 479 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 DLG2Q15700 870 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 EIF2S3LQ2VIR3 472 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 KRTCAP3Q53RY4 240 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 TCP11X2Q5H9J9 407 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 FAM72AQ5TYM5 149 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 KRT80Q6KB66 452 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 FAM72DQ6L9T8 149 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 NAA16Q6N069 864 aaPredicted RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 GTF2H2CQ6P1K8 395 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 PACS1Q6VY07 963 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 INTS8Q75QN2 995 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 FAM72BQ86X60 149 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 NRROSQ86YC3 692 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 MAP7D3Q8IWC1 876 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 SCYL3Q8IZE3 742 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 BEST3Q8N1M1 668 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 PGBD5Q8N414 524 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 MINDY1Q8N5J2 469 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 RFLNBQ8N5W9 214 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 C1orf52Q8N6N3 182 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 LILRB1Q8NHL6 650 aaPredicted RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 MOSPD2Q8NHP6 518 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 EXD1Q8NHP7 514 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 SMPDL3BQ92485 455 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 PHF21AQ96BD5 680 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 ZNF653Q96CK0 615 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 ELMOD3Q96FG2 381 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 IL17FQ96PD4 163 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 EVA1AQ9H8M9 152 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 KLHL1Q9NR64 748 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 MTMR10Q9NXD2 777 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 ADD3Q9UEY8 706 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 TINAGQ9UJW2 476 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 DLGAP4Q9Y2H0 992 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 CGNL1Q0VF96 1302 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 A0A0G2JPF8 293 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 ZCWPW2A0A1B0GU75 182 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 C1orf226A1L170 272 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 OR2A25A4D2G3 310 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 ASPDHA6ND91 283 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 OR5K3A6NET4 321 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 PRR32B1ATL7 298 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 HNRNPCL3B7ZW38 293 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 IGLV2-11P01706 119 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 HNRNPCL4P0DMR1 293 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 CETPP11597 493 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 AMD1P17707 334 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 DGKAP23743 735 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 SSTR2P30874 369 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 HADHAP40939 763 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 GARSP41250 739 aaKnown RBP2.07□□□□□ -2.08
CDC40-204ENST00000431461 SLC9A3P48764 834 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 CLCN3P51790 818 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 BNC1Q01954 994 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 NUCB1Q02818 461 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 RBM39Q14498 530 aaKnown RBP2.07□□□□□ -2.08
CDC40-204ENST00000431461 KCTD2Q14681 263 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 TAF13Q15543 124 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 C9orf152Q5JTZ5 239 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 CEP85LQ5SZL2 805 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 LRIF1Q5T3J3 769 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 GARNL3Q5VVW2 1013 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 ADALQ6DHV7 355 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 LINGO4Q6UY18 593 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 HAUS6Q7Z4H7 955 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 NFE4Q86UQ8 179 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 FOXRED2Q8IWF2 684 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 C1orf87Q8N0U7 546 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 GUF1Q8N442 669 aaKnown RBP2.07□□□□□ -2.08
CDC40-204ENST00000431461 AFAP1Q8N556 730 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 MAB21L3Q8N8X9 362 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 LMNTD1Q8N9Z9 388 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 IL17RCQ8NAC3 791 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 ZKSCAN4Q969J2 545 aaPredicted RBP2.07□□□□□ -2.08
CDC40-204ENST00000431461 ZNF622Q969S3 477 aaKnown RBP eCLIP2.07□□□□□ -2.08
CDC40-204ENST00000431461 GRAMD2BQ96HH9 432 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 PPP1R13BQ96KQ4 1090 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 EGLN2Q96KS0 407 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 CFAP57Q96MR6 1250 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 SEPHS2Q99611 448 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 EPYCQ99645 322 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 CMKLR1Q99788 373 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 EGFL8Q99944 293 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 TMX4Q9H1E5 349 aaPredicted RBP2.07□□□□□ -2.08
CDC40-204ENST00000431461 IL25Q9H293 177 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 LRMDAQ9H2I8 198 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 PIGMQ9H3S5 423 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 KCNK15Q9H427 330 aa2.07□□□□□ -2.08
CDC40-204ENST00000431461 RABEP2Q9H5N1 569 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms