RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 BROXQ5VW32 411 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 KIAA1324Q6UXG2 1013 aaKnown RBP11.41□□□□□ -0.58
PTCH1-208ENST00000430669 NETO2Q8NC67 525 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 IPPKQ9H8X2 491 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 SLC28A3Q9HAS3 691 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 AKAP7Q9P0M2 348 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-208ENST00000430669 PCDHGC4Q9Y5F7 938 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 MTCL1Q9Y4B5 1905 aaKnown RBP11.41□□□□□ -0.58
PTCH1-208ENST00000430669 LRRC72A6NJI9 287 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 ENTPD5O75356 428 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 IMPDH2P12268 514 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 SPIN4Q56A73 249 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 FAM171BQ6P995 826 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 DDHD1Q8NEL9 900 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 SH3RF2Q8TEC5 729 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 AZIN2Q96A70 460 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 KLHL32Q96NJ5 620 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 IFT80Q9P2H3 777 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-208ENST00000430669 GABRQQ9UN88 632 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 FGF18O76093 207 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 GRSF1Q12849 480 aaKnown RBP eCLIP11.41□□□□□ -0.58
PTCH1-208ENST00000430669 PPP2R2DQ66LE6 453 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 GALNT18Q6P9A2 607 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 RD3Q7Z3Z2 195 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 CFAP206Q8IYR0 622 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 PIK3C3Q8NEB9 887 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 KBTBD7Q8WVZ9 684 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 NUP214P35658 2090 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-208ENST00000430669 K7EPI3 171 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 WNT9AO14904 365 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 AOC1P19801 751 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 GUCA1AP43080 201 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-208ENST00000430669 GSTM4Q03013 218 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 C16orf62Q7Z3J2 963 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 NUS1Q96E22 293 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 IMP4Q96G21 291 aaKnown RBP11.4□□□□□ -0.58
PTCH1-208ENST00000430669 IGSF21Q96ID5 467 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 SLC38A2Q96QD8 506 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 SYT11Q9BT88 431 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 HSFX1Q9UBD0 423 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 SMIM31A0A1B0GVY4 71 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 FAM234BA2RU67 622 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 STX16-NPEPL1H3BU86 382 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 STX16O14662 325 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 MANFP55145 182 aaKnown RBP11.4□□□□□ -0.58
PTCH1-208ENST00000430669 MRPL28Q13084 256 aaKnown RBP11.4□□□□□ -0.58
PTCH1-208ENST00000430669 C10orf53Q8N6V4 93 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 UTP15Q8TED0 518 aaKnown RBP11.4□□□□□ -0.58
PTCH1-208ENST00000430669 CDKN2AIPNLQ96HQ2 116 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 KLHL3Q9UH77 587 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 EPHX1P07099 455 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 HLA-DQA1Q5Y7H0 255 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 PM20D1Q6GTS8 502 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 CDC73Q6P1J9 531 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 OR2AP1Q8NGE2 309 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 TMEM245Q9H330 911 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 CLK4Q9HAZ1 481 aaKnown RBP11.4□□□□□ -0.58
PTCH1-208ENST00000430669 EXD2Q9NVH0 621 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 MRPS33Q9Y291 106 aaKnown RBP11.4□□□□□ -0.58
PTCH1-208ENST00000430669 PAICSP22234 425 aaKnown RBP11.4□□□□□ -0.58
PTCH1-208ENST00000430669 PDK3Q15120 406 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 PDGFRLQ15198 375 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 NRF1Q16656 503 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 FGD3Q5JSP0 725 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 MS4A4AQ96JQ5 239 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 TBCDQ9BTW9 1192 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 CCNB1IP1Q9NPC3 277 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 ZIM2Q9NZV7 527 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 H3BN98 237 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 UGT2B11O75310 529 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 PCYT1AP49585 367 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 NRG1Q02297 640 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-208ENST00000430669 SEMA3AQ14563 771 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 DLG2Q15700 870 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 RAB30Q15771 203 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 RNF19BQ6ZMZ0 732 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 CPNE8Q86YQ8 564 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 SVOPLQ8N434 492 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 ROGDIQ9GZN7 287 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 C3orf14Q9HBI5 128 aa11.4□□□□□ -0.58
PTCH1-208ENST00000430669 PI15O43692 258 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 SLC16A1P53985 500 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 TAS2R39P59534 338 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 CDC42P60953 191 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 SRSF11Q05519 484 aaKnown RBP11.4□□□□□ -0.59
PTCH1-208ENST00000430669 AGMOQ6ZNB7 445 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 COLGALT2Q8IYK4 626 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 RNF148Q8N7C7 305 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 OR52L1Q8NGH7 329 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 TMEM209Q96SK2 561 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 GAS2L1Q99501 681 aaPredicted RBP11.4□□□□□ -0.59
PTCH1-208ENST00000430669 GATA5Q9BWX5 397 aaPredicted RBP11.4□□□□□ -0.59
PTCH1-208ENST00000430669 THUMPD1Q9NXG2 353 aaKnown RBP11.4□□□□□ -0.59
PTCH1-208ENST00000430669 GSRP00390 522 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 RPL17P18621 184 aaKnown RBP11.4□□□□□ -0.59
PTCH1-208ENST00000430669 FSHRP23945 695 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 NOS3P29474 1203 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 CMPK1P30085 196 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 VIPR1P32241 457 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 NR1H2P55055 460 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms