RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 RBM12BQ8IXT5 1001 aaKnown RBP14.23□□□□□ -0.13
SDC1-204ENST00000429035 SIDT2Q8NBJ9 832 aaKnown RBP14.23□□□□□ -0.13
SDC1-204ENST00000429035 GOLPH3Q9H4A6 298 aa14.23□□□□□ -0.13
SDC1-204ENST00000429035 TRABDQ9H4I3 376 aa14.23□□□□□ -0.13
SDC1-204ENST00000429035 UGT1A7Q9HAW7 530 aa14.23□□□□□ -0.13
SDC1-204ENST00000429035 UGT1A10Q9HAW8 530 aa14.23□□□□□ -0.13
SDC1-204ENST00000429035 UGT1A8Q9HAW9 530 aa14.23□□□□□ -0.13
SDC1-204ENST00000429035 SLC40A1Q9NP59 571 aa14.23□□□□□ -0.13
SDC1-204ENST00000429035 RSPH14Q9UHP6 348 aa14.23□□□□□ -0.13
SDC1-204ENST00000429035 POLHQ9Y253 713 aa14.23□□□□□ -0.13
SDC1-204ENST00000429035 PKP3Q9Y446 797 aa14.23□□□□□ -0.13
SDC1-204ENST00000429035 CFAP20Q9Y6A4 193 aaKnown RBP14.23□□□□□ -0.13
SDC1-204ENST00000429035 MACROD2A1Z1Q3 448 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 MKRN2OSH3BPM6 223 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 TOX3O15405 576 aaPredicted RBP14.22□□□□□ -0.13
SDC1-204ENST00000429035 PSTPIP1O43586 416 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 POP7O75817 140 aaKnown RBP14.22□□□□□ -0.13
SDC1-204ENST00000429035 TIAF1O95411 115 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 CCNYL3P0C7X3 344 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 HMGCLP35914 325 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 CDKN2BP42772 138 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 NR2C2P49116 596 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 CTSCP53634 463 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 WASHC5Q12768 1159 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 DNASE1L3Q13609 305 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 IL11RAQ14626 422 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 DNTTIP2Q5QJE6 756 aaKnown RBP14.22□□□□□ -0.13
SDC1-204ENST00000429035 LDLRAP1Q5SW96 308 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 GPRC6AQ5T6X5 926 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 AGAP9Q5VTM2 703 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 DUS1LQ6P1R4 473 aaKnown RBP14.22□□□□□ -0.13
SDC1-204ENST00000429035 TMEM220Q6QAJ8 160 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 KDELC1Q6UW63 502 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 PID1Q7Z2X4 250 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 C11orf96Q7Z7L8 435 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 TMEM135Q86UB9 458 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 VSTM4Q8IW00 320 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 RASGEF1AQ8N9B8 481 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 BRSK1Q8TDC3 778 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 CT55Q8WUE5 264 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 P3H4Q92791 437 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 MRGPRX2Q96LB1 330 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 TWSG1Q9GZX9 223 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 PDE7BQ9NP56 450 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 IL26Q9NPH9 171 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 HACD3Q9P035 362 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 KCND3Q9UK17 655 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 RARRES3Q9UL19 164 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 MAN2B2Q9Y2E5 1009 aa14.22□□□□□ -0.13
SDC1-204ENST00000429035 UBA6A0AVT1 1052 aaPredicted RBP14.21□□□□□ -0.13
SDC1-204ENST00000429035 PIPSLA2A3N6 862 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 FURINP09958 794 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 EBLN1P0CF75 366 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 FGF5P12034 268 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 NELFEP18615 380 aaKnown RBP14.21□□□□□ -0.13
SDC1-204ENST00000429035 HLA-DPA1P20036 260 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 MSH3P20585 1137 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 FECHP22830 423 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 ARCN1P48444 511 aaKnown RBP14.21□□□□□ -0.13
SDC1-204ENST00000429035 ITGA9Q13797 1035 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 SLC1A5Q15758 541 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 RPE65Q16518 533 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 FNBP1LQ5T0N5 605 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 CCDC181Q5TID7 509 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 ZDHHC20Q5W0Z9 365 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 WASH2PQ6VEQ5 465 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 FAM83HQ6ZRV2 1179 aaPredicted RBP14.21□□□□□ -0.13
SDC1-204ENST00000429035 ZNF567Q8N184 647 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 BEND7Q8N7W2 519 aaPredicted RBP14.21□□□□□ -0.13
SDC1-204ENST00000429035 RNF214Q8ND24 703 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 NAT14Q8WUY8 206 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 OXNAD1Q96HP4 312 aaPredicted RBP14.21□□□□□ -0.13
SDC1-204ENST00000429035 C12orf66Q96MD2 445 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 QKIQ96PU8 341 aaKnown RBP eCLIP14.21□□□□□ -0.13
SDC1-204ENST00000429035 MAP3K3Q99759 626 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 FICDQ9BVA6 458 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 WASH6PQ9NQA3 447 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 KCNMB2Q9Y691 235 aa14.21□□□□□ -0.13
SDC1-204ENST00000429035 IGHV5-51A0A0C4DH38 117 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 LOC285095A0A1B0GVY8 99 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 H7C0C1 242 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 STX7O15400 261 aaKnown RBP14.2□□□□□ -0.14
SDC1-204ENST00000429035 MTSS1O43312 755 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 RFPL1O75677 317 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 PRAMEF1O95521 474 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 MT-ND3P03897 115 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 MTHFD1P11586 935 aaKnown RBP14.2□□□□□ -0.14
SDC1-204ENST00000429035 FOLR1P15328 257 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 CA5AP35218 305 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 ATP5OP48047 213 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 MARCKSL1P49006 195 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 RPS18P62269 152 aaKnown RBP14.2□□□□□ -0.14
SDC1-204ENST00000429035 FOXK1P85037 733 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 ADCY2Q08462 1091 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 KLRB1Q12918 225 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 MPP3Q13368 585 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 PTPRCAPQ14761 206 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.2□□□□□ -0.14
SDC1-204ENST00000429035 TFDP3Q5H9I0 405 aa14.2□□□□□ -0.14
SDC1-204ENST00000429035 ARMC6Q6NXE6 501 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms