RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CRABP2P29373 138 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 CSNK1EP49674 416 aaKnown RBP7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 PGGT1BP53609 377 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 SRP54P61011 504 aaKnown RBP7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 OVGP1Q12889 678 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 DNAJC3Q13217 504 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 FZD2Q14332 565 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZKSCAN8Q15776 578 aaPredicted RBP7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 INSCQ1MX18 579 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 ALG11Q2TAA5 492 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 KCTD16Q68DU8 428 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 UGT3A1Q6NUS8 523 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 RD3Q7Z3Z2 195 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 IQCHQ86VS3 1027 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 PARGQ86W56 976 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 DCP2Q8IU60 420 aaKnown RBP7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 CEP97Q8IW35 865 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 CPNE9Q8IYJ1 553 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 C4orf33Q8N1A6 199 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 SLC22A18ASQ8N1D0 253 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 SIDT2Q8NBJ9 832 aaKnown RBP7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 GIMAP7Q8NHV1 300 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 CD200R1Q8TD46 325 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 SKA2Q8WVK7 121 aaPredicted RBP7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 ELMO1Q92556 727 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 LINGO1Q96FE5 620 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZC3H10Q96K80 434 aaKnown RBP7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 TSNARE1Q96NA8 513 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 CCM2Q9BSQ5 444 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 LRFN3Q9BTN0 628 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 OSGEPL1Q9H4B0 414 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 RMI1Q9H9A7 625 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 TMBIM4Q9HC24 238 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 GPAMQ9HCL2 828 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 MRPL40Q9NQ50 206 aaKnown RBP7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 SPATS2LQ9NUQ6 558 aaKnown RBP7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 DNAJC28Q9NX36 388 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 TLK1Q9UKI8 766 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 SUFUQ9UMX1 484 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 DNAJC16Q9Y2G8 782 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 GPSM3Q9Y4H4 160 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 R4GN57 208 aa7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF106Q9H2Y7 1883 aaKnown RBP7.79□□□□□ -1.16
HMGA1P4-201ENST00000428643 A0A087X1B8 175 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 SPTY2D1-AS1A0A0U1RR47 76 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 A0A1B0GTW7 788 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 A0A1B0GVT2 93 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 A0A1W2PPM1 405 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 MGAT4DA6NG13 374 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 PRR5-ARHGAP8B1AHC4 643 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 TLR4O00206 839 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 TNFRSF10CO14798 259 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 CHUKO15111 745 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 VILLO15195 856 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 LILRB5O75023 590 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 RFPL1O75677 317 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 POP7O75817 140 aaKnown RBP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 MPOP05164 745 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 SLC35E2BP0CK96 405 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF37AP17032 561 aaPredicted RBP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 KRT4P19013 534 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 CCR7P32248 378 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 SKIV2L2P42285 1042 aaKnown RBP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 DPP6P42658 865 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 PREPP48147 710 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 RGS4P49798 205 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 CLCN7P51798 805 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 NXPH1P58417 271 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 MAGOHP61326 146 aaKnown RBP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 PPARDQ03181 441 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 HSPA14Q0VDF9 509 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 ILF3Q12906 894 aaKnown RBP eCLIP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 PYCR3Q53H96 274 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF542PQ5EBM4 170 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 PPM1JQ5JR12 505 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 AGBL2Q5U5Z8 902 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 NAPRTQ6XQN6 538 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 CHST15Q7LFX5 561 aaPredicted RBP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 TBC1D1Q86TI0 1168 aaPredicted RBP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 TRABD2AQ86V40 505 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 AMZ2Q86W34 360 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 SYT12Q8IV01 421 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF547Q8IVP9 402 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 SPNS2Q8IVW8 549 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 PHACTR4Q8IZ21 702 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 OXR1Q8N573 874 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 C1orf216Q8TAB5 229 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 HM13Q8TCT9 377 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 MZB1Q8WU39 189 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 INPP5DQ92835 1189 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 TSACCQ96A04 125 aaPredicted RBP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 ISL2Q96A47 359 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 TMEM159Q96B96 161 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 ARL8AQ96BM9 186 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 CABS1Q96KC9 395 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 ATP6V1G3Q96LB4 118 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 SMC6Q96SB8 1091 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 SH3GL2Q99962 352 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 SLC13A1Q9BZW2 595 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 IQCGQ9H095 443 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms