RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ACP5P13686 325 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 ATP1B2P14415 290 aaPredicted RBP8.98□□□□□ -0.97
SMC1A-203ENST00000428014 MSH3P20585 1137 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 ACRV1P26436 265 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 CD1CP29017 333 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 RBMS1P29558 406 aaKnown RBP8.98□□□□□ -0.97
SMC1A-203ENST00000428014 EIF2S3P41091 472 aaKnown RBP8.98□□□□□ -0.97
SMC1A-203ENST00000428014 HALP42357 657 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 RAB15P59190 212 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 CCL7P80098 99 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 INSCQ1MX18 579 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 ZNF658BQ4V348 819 aaPredicted RBP8.98□□□□□ -0.97
SMC1A-203ENST00000428014 PCID2Q5JVF3 399 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 PAPD7Q5XG87 772 aaKnown RBP8.98□□□□□ -0.97
SMC1A-203ENST00000428014 DOK6Q6PKX4 331 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 AFTPHQ6ULP2 937 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 TMEM26Q6ZUK4 368 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 KDELC2Q7Z4H8 507 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 ARHGAP22Q7Z5H3 698 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 TRIM74Q86UV6 250 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 BPHLQ86WA6 291 aaPredicted RBP8.98□□□□□ -0.97
SMC1A-203ENST00000428014 LRRC6Q86X45 466 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 KMT5CQ86Y97 462 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 PLXDC1Q8IUK5 500 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 LMNTD2Q8IXW0 634 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 SLC25A41Q8N5S1 370 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 PRELID2Q8N945 189 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 HM13Q8TCT9 377 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 FCRL4Q96PJ5 515 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 TCF12Q99081 682 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 CD180Q99467 661 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 DDA1Q9BW61 102 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 ASPSCR1Q9BZE9 553 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 TWSG1Q9GZX9 223 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 SLC40A1Q9NP59 571 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 RAB6BQ9NRW1 208 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 KLC4Q9NSK0 619 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 BFARQ9NZS9 450 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 CPNE7Q9UBL6 633 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 SNX12Q9UMY4 172 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 PIKFYVEQ9Y2I7 2098 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 E7EVH7 732 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 LIN7AO14910 233 aaPredicted RBP8.97□□□□□ -0.97
SMC1A-203ENST00000428014 CEP104O60308 925 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 BRINP1O60477 761 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 POP7O75817 140 aaKnown RBP8.97□□□□□ -0.97
SMC1A-203ENST00000428014 IFNB1P01574 187 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 RPL22P35268 128 aaKnown RBP8.97□□□□□ -0.97
SMC1A-203ENST00000428014 GABREP78334 506 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 CYP4F3Q08477 520 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 ILF2Q12905 390 aaKnown RBP8.97□□□□□ -0.97
SMC1A-203ENST00000428014 BIRC2Q13490 618 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 KHDC1Q4VXA5 237 aaKnown RBP8.97□□□□□ -0.97
SMC1A-203ENST00000428014 TSTD2Q5T7W7 516 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 TMEM164Q5U3C3 297 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 ALS2CLQ60I27 953 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 CAPRIN2Q6IMN6 1127 aaKnown RBP8.97□□□□□ -0.97
SMC1A-203ENST00000428014 LRRC8BQ6P9F7 803 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 ZNF449Q6P9G9 518 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 XKR5Q6UX68 686 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 FAM151BQ6UXP7 276 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 SYDE1Q6ZW31 735 aaPredicted RBP8.97□□□□□ -0.97
SMC1A-203ENST00000428014 B4GALNT4Q76KP1 1039 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 RAB11FIP2Q7L804 512 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 TRAPPC5Q8IUR0 188 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 RASGEF1AQ8N9B8 481 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 DNAAF3Q8N9W5 541 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 AGBL5Q8NDL9 886 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 PHC3Q8NDX5 983 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 OR13J1Q8NGT2 312 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 ATG4AQ8WYN0 398 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 DCUN1D1Q96GG9 259 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 OSBPL9Q96SU4 736 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 SLC38A3Q99624 504 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 KIFC1Q9BW19 673 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 PRR14Q9BWN1 585 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 XAB2Q9HCS7 855 aaKnown RBP8.97□□□□□ -0.97
SMC1A-203ENST00000428014 TREX1Q9NSU2 369 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 KCNK4Q9NYG8 393 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 SIRPGQ9P1W8 387 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 PCYOX1Q9UHG3 505 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 CRLS1Q9UJA2 301 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 NEU2Q9Y3R4 380 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 TCAF1Q9Y4C2 921 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 MRFAP1Q9Y605 127 aa8.97□□□□□ -0.97
SMC1A-203ENST00000428014 DSPP15924 2871 aaKnown RBP8.97□□□□□ -0.97
SMC1A-203ENST00000428014 FAM149AA5PLN7 773 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 CCDC188H7C350 402 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 KPNA5O15131 536 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 PFDN6O15212 129 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 SGTAO43765 313 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 KDM1AO60341 852 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 VIPP01282 170 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 FTH1P02794 183 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 APRTP07741 180 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 BRAFP15056 766 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 MC4RP32245 332 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 FOXN2P32314 431 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 SLC19A1P41440 591 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 MAGEA3P43357 314 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms