RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 XAB2Q9HCS7 855 aaKnown RBP15.46■□□□□ 0.06
CLK3P2-201ENST00000427566 IL1RAPL1Q9NZN1 696 aa15.46■□□□□ 0.06
CLK3P2-201ENST00000427566 LRIT1Q9P2V4 623 aa15.46■□□□□ 0.06
CLK3P2-201ENST00000427566 RIMKLBQ9ULI2 386 aa15.46■□□□□ 0.06
CLK3P2-201ENST00000427566 SOX13Q9UN79 622 aa15.46■□□□□ 0.06
CLK3P2-201ENST00000427566 KCNK6Q9Y257 313 aa15.46■□□□□ 0.06
CLK3P2-201ENST00000427566 PCDHB1Q9Y5F3 818 aa15.46■□□□□ 0.06
CLK3P2-201ENST00000427566 RNF215Q9Y6U7 377 aa15.46■□□□□ 0.06
CLK3P2-201ENST00000427566 MAP1BP46821 2468 aaKnown RBP15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 KNTC1P50748 2209 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 FAM187AA6NFU0 413 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 OR2AG2A6NM03 316 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 AP3B1O00203 1094 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 SGTAO43765 313 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 VEGFDO43915 354 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 SNX2O60749 519 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 RPLP0P05388 317 aaKnown RBP15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 GLB1P16278 677 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 ARNTP27540 789 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 CCL7P80098 99 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 CACNG1Q06432 222 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 CUL1Q13616 776 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 CASC4Q6P4E1 433 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 OGFOD3Q6PK18 319 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 RBM44Q6ZP01 1051 aaKnown RBP15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 NLRP9Q7RTR0 991 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 C11orf96Q7Z7L8 435 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 PCGF5Q86SE9 256 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 HOOK3Q86VS8 718 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 BEND7Q8N7W2 519 aaPredicted RBP15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 DCBLD1Q8N8Z6 715 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 OR6C4Q8NGE1 309 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 OR6P1Q8NGX9 317 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 NXPE2Q96DL1 559 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 SGF29Q96ES7 293 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 SNF8Q96H20 258 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 TTC25Q96NG3 672 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 FCRL3Q96P31 734 aaPredicted RBP15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 ERP44Q9BS26 406 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 RMI1Q9H9A7 625 aa15.45■□□□□ 0.06
CLK3P2-201ENST00000427566 SDR42E2A6NKP2 422 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 RHPN2P1A8MT19 583 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 GOLGA8KD6RF30 607 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 GOLGA8TH3BQL2 631 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 EML2O95834 649 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 ACRV1P26436 265 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 AKT1P31749 480 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 PRAMEP78395 509 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 DHX9Q08211 1270 aaKnown RBP15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 LAMB3Q13751 1172 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 GTF2H3Q13889 308 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 LRP8Q14114 963 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 HLTFQ14527 1009 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 MORF4L2Q15014 288 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 DBN1Q16643 649 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 INSCQ1MX18 579 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 HP1BP3Q5SSJ5 553 aaPredicted RBP15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 CDCP2Q5VXM1 449 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 DUPD1Q68J44 220 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 TMEM220Q6QAJ8 160 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 LDB1Q86U70 411 aaPredicted RBP15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 TRAPPC5Q8IUR0 188 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 IGDCC3Q8IVU1 814 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 KDF1Q8NAX2 398 aaPredicted RBP15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 OR4L1Q8NH43 312 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 GFM1Q96RP9 751 aaKnown RBP15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 OSGEPL1Q9H4B0 414 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 MRM3Q9HC36 420 aaKnown RBP15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 MARCH4Q9P2E8 410 aaPredicted RBP15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 CHD8Q9HCK8 2581 aa15.44■□□□□ 0.06
CLK3P2-201ENST00000427566 TPRP12270 2363 aaKnown RBP15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 AGRPO00253 132 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 ACACBO00763 2458 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 MSH3P20585 1137 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 ALDH4A1P30038 563 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 CARSP49589 748 aaKnown RBP15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 GPR33Q49SQ1 333 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 FOXR1Q6PIV2 292 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 AFTPHQ6ULP2 937 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 LRRTM4Q86VH4 590 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 CCNJLQ8IV13 435 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 GSPT2Q8IYD1 628 aaKnown RBP15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 NAGSQ8N159 534 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 ARL14Q8N4G2 192 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 CLDN19Q8N6F1 224 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 SEC14L1Q92503 715 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 PEX13Q92968 403 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 ULK4Q96C45 1275 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 WDR83Q9BRX9 315 aaKnown RBP15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 RAB17Q9H0T7 212 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 LRRN3Q9H3W5 708 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 MED4Q9NPJ6 270 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 KLC4Q9NSK0 619 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 ZDHHC3Q9NYG2 299 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 GRHL1Q9NZI5 618 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 ANAPC5Q9UJX4 755 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 ATXN7L1Q9ULK2 861 aaPredicted RBP15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 DNAJC16Q9Y2G8 782 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 MAD1L1Q9Y6D9 718 aa15.43■□□□□ 0.06
CLK3P2-201ENST00000427566 PRSS21Q9Y6M0 314 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms