RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 OR8K5Q8NH50 307 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 ADAMTS17Q8TE56 1095 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 CPT1BQ92523 772 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 FATE1Q969F0 183 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 CLIP3Q96DZ5 547 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 SGSM3Q96HU1 749 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 TSGA13Q96PP4 275 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 CD180Q99467 661 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 HRASLS2Q9NWW9 162 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 IP6K2Q9UHH9 426 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 TCFL5Q9UL49 500 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 PSMD13Q9UNM6 376 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 TLCD2A6NGC4 264 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 F5H423 210 aaPredicted RBP14.33□□□□□ -0.12
PDAP1-202ENST00000426447 MEN1O00255 615 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 DDX3XO00571 662 aaKnown RBP eCLIP14.33□□□□□ -0.127e-14■■■■□ 20.9
PDAP1-202ENST00000426447 KCNJ13O60928 360 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 CD48P09326 243 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 RAB40ALP0C0E4 278 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 MX2P20592 715 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 ITGA1P56199 1179 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 CDK18Q07002 472 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 TMEM115Q12893 351 aaPredicted RBP14.33□□□□□ -0.12
PDAP1-202ENST00000426447 NAA30Q147X3 362 aaPredicted RBP14.33□□□□□ -0.12
PDAP1-202ENST00000426447 HADHQ16836 314 aaKnown RBP14.33□□□□□ -0.12
PDAP1-202ENST00000426447 TMC3Q7Z5M5 1100 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 AMZ2Q86W34 360 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 SLC34A3Q8N130 599 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 SLC38A9Q8NBW4 561 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 KCTD6Q8NC69 237 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 ZNF501Q96CX3 271 aaPredicted RBP14.33□□□□□ -0.12
PDAP1-202ENST00000426447 MOCOSQ96EN8 888 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 BTBD6Q96KE9 485 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 SMAD5Q99717 465 aaKnown RBP14.33□□□□□ -0.12
PDAP1-202ENST00000426447 NLNQ9BYT8 704 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 SLC7A5P2Q9GIP4 190 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 MAGEE1Q9HCI5 957 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 SOHLH2Q9NX45 425 aa14.33□□□□□ -0.12
PDAP1-202ENST00000426447 OR5K3A6NET4 321 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 ZBTB11O95625 1053 aaPredicted RBP14.32□□□□□ -0.12
PDAP1-202ENST00000426447 MMP2P08253 660 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 GJC1P36383 396 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 MYL5Q02045 173 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 SLC25A11Q02978 314 aaKnown RBP14.32□□□□□ -0.12
PDAP1-202ENST00000426447 KLHL30Q0D2K2 578 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 RPE65Q16518 533 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 KHDC1Q4VXA5 237 aaKnown RBP14.32□□□□□ -0.12
PDAP1-202ENST00000426447 PLEKHS1Q5SXH7 462 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 FAM69BQ5VUD6 431 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 LYPLAL1Q5VWZ2 237 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 LCN10Q6JVE6 187 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 CCDC70Q6NSX1 233 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 ZNF517Q6ZMY9 492 aaPredicted RBP14.32□□□□□ -0.12
PDAP1-202ENST00000426447 OOSP2Q86WS3 158 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 GLIS1Q8NBF1 620 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 GPR150Q8NGU9 434 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 BRSK1Q8TDC3 778 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 LRFN5Q96NI6 719 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 ILKAPQ9H0C8 392 aaPredicted RBP14.32□□□□□ -0.12
PDAP1-202ENST00000426447 FANCEQ9HB96 536 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 IMP3Q9NV31 184 aaKnown RBP14.32□□□□□ -0.12
PDAP1-202ENST00000426447 C5AR2Q9P296 337 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 ANAPC7Q9UJX3 599 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 B3GNT3Q9Y2A9 372 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 ZNF711Q9Y462 761 aa14.32□□□□□ -0.12
PDAP1-202ENST00000426447 COPG1Q9Y678 874 aaKnown RBP14.32□□□□□ -0.12
PDAP1-202ENST00000426447 ZNF106Q9H2Y7 1883 aaKnown RBP14.31□□□□□ -0.12
PDAP1-202ENST00000426447 KCNK1O00180 336 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 DDX3YO15523 660 aaKnown RBP14.31□□□□□ -0.12
PDAP1-202ENST00000426447 POP7O75817 140 aaKnown RBP14.31□□□□□ -0.12
PDAP1-202ENST00000426447 SKILP12757 684 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 BPIP17213 487 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 XRCC4Q13426 336 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 DPYSL3Q14195 570 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 PCSK7Q16549 785 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 VWA5B1Q5TIE3 1220 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 PRAMEF17Q5VTA0 474 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 HGSNATQ68CP4 663 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 C11orf96Q7Z7L8 435 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 MAP7D3Q8IWC1 876 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 DSELQ8IZU8 1212 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 ZBTB2Q8N680 514 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 NIPA2Q8N8Q9 360 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 ZNF830Q96NB3 372 aaPredicted RBP14.31□□□□□ -0.12
PDAP1-202ENST00000426447 ISCUQ9H1K1 167 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 BPIFA1Q9NP55 256 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 IGSF5Q9NSI5 407 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 AIPL1Q9NZN9 384 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 TMEM63CQ9P1W3 806 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 NFKBIL1Q9UBC1 381 aaPredicted RBP14.31□□□□□ -0.12
PDAP1-202ENST00000426447 SHANK1Q9Y566 2161 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 ITPR2Q14571 2701 aa14.31□□□□□ -0.12
PDAP1-202ENST00000426447 OR6C74A6NCV1 312 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 MYO1FO00160 1098 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 ALPPP05187 535 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 GLRBP48167 497 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 ATP1A4Q13733 1029 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 ATP13A5Q4VNC0 1218 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 ATP13A4Q4VNC1 1196 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms