RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 NECTIN3Q9NQS3 549 aa17.12■□□□□ 0.33
RARA-206ENST00000425707 FBXO8Q9NRD0 319 aa17.12■□□□□ 0.33
RARA-206ENST00000425707 FAM105AQ9NUU6 356 aa17.12■□□□□ 0.33
RARA-206ENST00000425707 MED16Q9Y2X0 877 aa17.12■□□□□ 0.33
RARA-206ENST00000425707 KRBA1A5PL33 1030 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 M0QX08 132 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 M0QZQ0 153 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 CNOT3O75175 753 aaKnown RBP17.11■□□□□ 0.33
RARA-206ENST00000425707 EIF2S1P05198 315 aaKnown RBP17.11■□□□□ 0.33
RARA-206ENST00000425707 IDUAP35475 653 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 AQP6Q13520 282 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 SPCS2Q15005 226 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 CYP2A13Q16696 494 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 SMU1Q2TAY7 513 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 ALG1LQ6GMV1 187 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 PAQR3Q6TCH7 311 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 NECAB2Q7Z6G3 386 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 PGBD5Q8N414 524 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 GAD1Q99259 594 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 HGH1Q9BTY7 390 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 POLR1EQ9GZS1 481 aaKnown RBP17.11■□□□□ 0.33
RARA-206ENST00000425707 MAGIXQ9H6Y5 334 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 TMLHEQ9NVH6 421 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 NLE1Q9NVX2 485 aaPredicted RBP17.11■□□□□ 0.33
RARA-206ENST00000425707 FAM92AA1XBS5 289 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 SLC16A6O15403 523 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 HAPLN1P10915 354 aaPredicted RBP17.11■□□□□ 0.33
RARA-206ENST00000425707 ECT2LQ008S8 904 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 PARP15Q460N3 678 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 SLC2A7Q6PXP3 512 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 DPP9Q86TI2 863 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 HOMEZQ8IX15 550 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 GIPC2Q8TF65 315 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 RPL10LQ96L21 214 aaKnown RBP17.11■□□□□ 0.33
RARA-206ENST00000425707 USP22Q9UPT9 525 aa17.11■□□□□ 0.33
RARA-206ENST00000425707 TMEM247A6NEH6 219 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 MT-ND1P03886 318 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 HTR1BP28222 390 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 YWHAHQ04917 246 aaPredicted RBP17.1■□□□□ 0.33
RARA-206ENST00000425707 TSNQ15631 228 aaKnown RBP17.1■□□□□ 0.33
RARA-206ENST00000425707 BCL2A1Q16548 175 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 FNDC5Q8NAU1 212 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 ZNF583Q96ND8 569 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 KLHL5Q96PQ7 755 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 CACNG4Q9UBN1 327 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 DAPK2Q9UIK4 370 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 C3orf18Q9UK00 162 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 FAM32AQ9Y421 112 aaKnown RBP17.1■□□□□ 0.33
RARA-206ENST00000425707 AGAP7PQ5VUJ5 663 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 ZNF691Q5VV52 312 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 AFTPHQ6ULP2 937 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 RNF165Q6ZSG1 346 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 CDKN2AIPNLQ96HQ2 116 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 NODALQ96S42 347 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 AMBRA1Q9C0C7 1298 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 MIOSQ9NXC5 875 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 ARL5AQ9Y689 179 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 HTR3EA5X5Y0 456 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 ANKRD28O15084 1053 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 MRPS14O60783 128 aaKnown RBP17.1■□□□□ 0.33
RARA-206ENST00000425707 SCELO95171 688 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 ACVR2AP27037 513 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 ISL1P61371 349 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 DPY19L1Q2PZI1 675 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 Q6ZSR9 355 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 PSMG2Q969U7 264 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 EFHD2Q96C19 240 aaPredicted RBP17.1■□□□□ 0.33
RARA-206ENST00000425707 RNF181Q9P0P0 153 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 NEUROG3Q9Y4Z2 214 aa17.1■□□□□ 0.33
RARA-206ENST00000425707 ARL5CA6NH57 179 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 ZNF99A8MXY4 864 aaPredicted RBP17.09■□□□□ 0.33
RARA-206ENST00000425707 E2F3O00716 465 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 CNTN5O94779 1100 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 GRK3P35626 688 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 CASP2P42575 452 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 TMED10P49755 219 aaKnown RBP17.09■□□□□ 0.33
RARA-206ENST00000425707 YBEYP58557 167 aaPredicted RBP17.09■□□□□ 0.33
RARA-206ENST00000425707 CD47Q08722 323 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 PLA2G4EQ3MJ16 856 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 MRPL10Q7Z7H8 261 aaKnown RBP17.09■□□□□ 0.33
RARA-206ENST00000425707 SCAIQ8N9R8 606 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 SH3GL1Q99961 368 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 ANKHQ9HCJ1 492 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 WARS2Q9UGM6 360 aaKnown RBP17.09■□□□□ 0.33
RARA-206ENST00000425707 IKZF3Q9UKT9 509 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 C17orf102A2RUQ5 167 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 SLC1A7O00341 560 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 NDUFS2O75306 463 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 KCNH1O95259 989 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 MOCS2O96007 188 aaPredicted RBP17.09■□□□□ 0.33
RARA-206ENST00000425707 ITGAMP11215 1152 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 IL7RP16871 459 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 PRDX3P30048 256 aaKnown RBP17.09■□□□□ 0.33
RARA-206ENST00000425707 HPCAL1P37235 193 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 SERPINB10P48595 397 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 ZNF140P52738 457 aaPredicted RBP17.09■□□□□ 0.33
RARA-206ENST00000425707 TSPY1Q01534 308 aa17.09■□□□□ 0.33
RARA-206ENST00000425707 POLD3Q15054 466 aaPredicted RBP17.09■□□□□ 0.33
RARA-206ENST00000425707 RBBP7Q16576 425 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms