RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 AGR3Q8TD06 166 aa14.98□□□□□ -0.01
ACTB-204ENST00000425660 DCUN1D1Q96GG9 259 aa14.98□□□□□ -0.01
ACTB-204ENST00000425660 PRR11Q96HE9 360 aaPredicted RBP14.98□□□□□ -0.01
ACTB-204ENST00000425660 FAR2Q96K12 515 aa14.98□□□□□ -0.01
ACTB-204ENST00000425660 NUDT4Q9NZJ9 180 aa14.98□□□□□ -0.01
ACTB-204ENST00000425660 FADS3Q9Y5Q0 445 aa14.98□□□□□ -0.01
ACTB-204ENST00000425660 H3BQ06 376 aaPredicted RBP14.97□□□□□ -0.01
ACTB-204ENST00000425660 MYO1CO00159 1063 aa14.97□□□□□ -0.01
ACTB-204ENST00000425660 AP1G1O43747 822 aa14.97□□□□□ -0.01
ACTB-204ENST00000425660 RECQL5O94762 991 aaPredicted RBP14.97□□□□□ -0.01
ACTB-204ENST00000425660 AKT1P31749 480 aa14.97□□□□□ -0.01
ACTB-204ENST00000425660 PSMD8P48556 350 aa14.97□□□□□ -0.01
ACTB-204ENST00000425660 CNTN1Q12860 1018 aa14.97□□□□□ -0.01
ACTB-204ENST00000425660 SLC9B1Q4ZJI4 515 aa14.97□□□□□ -0.01
ACTB-204ENST00000425660 RPS27LQ71UM5 84 aaKnown RBP14.97□□□□□ -0.01
ACTB-204ENST00000425660 RALGPS2Q86X27 583 aaPredicted RBP14.97□□□□□ -0.01
ACTB-204ENST00000425660 MAELQ96JY0 434 aaKnown RBP14.97□□□□□ -0.01
ACTB-204ENST00000425660 GABRG3Q99928 467 aa14.97□□□□□ -0.01
ACTB-204ENST00000425660 TUBB6Q9BUF5 446 aa14.97□□□□□ -0.01
ACTB-204ENST00000425660 COL4A2P08572 1712 aa14.97□□□□□ -0.01
ACTB-204ENST00000425660 CKAP5Q14008 2032 aa14.97□□□□□ -0.01
ACTB-204ENST00000425660 C2CD4DB7Z1M9 353 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 PLK4O00444 970 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 KPNA5O15131 536 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 NUAK1O60285 661 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 HNRNPCL1O60812 293 aaKnown RBP14.96□□□□□ -0.01
ACTB-204ENST00000425660 DIAPH2O60879 1101 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 ADH1BP00325 375 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 FGF4P08620 206 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 MSH3P20585 1137 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 C5AR1P21730 350 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 TBCCQ15814 346 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 CST6Q15828 149 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 C2orf27AQ580R0 203 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 AGBL4Q5VU57 503 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 TICRRQ7Z2Z1 1910 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 AADATQ8N5Z0 425 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 PDPRQ8NCN5 879 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 NUS1Q96E22 293 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 CCDC106Q9BWC9 280 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 SHCBP1LQ9BZQ2 653 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 RDH14Q9HBH5 336 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 TNFRSF12AQ9NP84 129 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 CNOT6Q9ULM6 557 aaKnown RBP14.96□□□□□ -0.01
ACTB-204ENST00000425660 OARD1Q9Y530 152 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 NEMP1O14524 444 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 RNASEH1O60930 286 aaKnown RBP14.96□□□□□ -0.01
ACTB-204ENST00000425660 MTX2O75431 263 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 CDK14O94921 469 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 CBX6O95503 412 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 C7P10643 843 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 TARSP26639 723 aaKnown RBP14.96□□□□□ -0.01
ACTB-204ENST00000425660 EEF1DP29692 281 aaKnown RBP14.96□□□□□ -0.01
ACTB-204ENST00000425660 SH3BP2P78314 561 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 LCP2Q13094 533 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 TMEM196Q5HYL7 178 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 PLEKHS1Q5SXH7 462 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 ANKS6Q68DC2 871 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 PHYKPLQ8IUZ5 450 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 DNASE1L2Q92874 299 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 FAM131CQ96AQ9 280 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 PTCD3Q96EY7 689 aaKnown RBP14.96□□□□□ -0.01
ACTB-204ENST00000425660 FAM126AQ9BYI3 521 aaPredicted RBP14.96□□□□□ -0.01
ACTB-204ENST00000425660 EPHX3Q9H6B9 360 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 KCNK12Q9HB15 430 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 TCF7L2Q9NQB0 619 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 ARMCX1Q9P291 453 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 LNPEPQ9UIQ6 1025 aa14.96□□□□□ -0.01
ACTB-204ENST00000425660 TRPC5OSA6NMA1 111 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 TMEM233B4DJY2 109 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 FFAR2O15552 330 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 TSPAN6O43657 245 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 SYNCRIPO60506 623 aaKnown RBP14.95□□□□□ -0.02
ACTB-204ENST00000425660 SNX2O60749 519 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 MMP20O60882 483 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 JUNP05412 331 aaKnown RBP14.95□□□□□ -0.02
ACTB-204ENST00000425660 AOC1P19801 751 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 NTSR1P30989 418 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 TIE1P35590 1138 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 WASP42768 502 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 COPAP53621 1224 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 INHBCP55103 352 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 CDH13P55290 713 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 TAS2R38P59533 333 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 CLCQ05315 142 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 SMAD4Q13485 552 aaKnown RBP14.95□□□□□ -0.02
ACTB-204ENST00000425660 HABP4Q5JVS0 413 aaKnown RBP14.95□□□□□ -0.02
ACTB-204ENST00000425660 DET1Q7L5Y6 550 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 PELI3Q8N2H9 469 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 SLC44A3Q8N4M1 653 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 AFAP1L2Q8N4X5 818 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 ZNF483Q8TF39 744 aaPredicted RBP14.95□□□□□ -0.02
ACTB-204ENST00000425660 DLG3Q92796 817 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 OR52B2Q96RD2 323 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 CCDC28BQ9BUN5 200 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 NUF2Q9BZD4 464 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 LRMDAQ9H2I8 198 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 C8orf33Q9H7E9 229 aaPredicted RBP14.95□□□□□ -0.02
ACTB-204ENST00000425660 FBRSQ9HAH7 460 aa14.95□□□□□ -0.02
ACTB-204ENST00000425660 CD274Q9NZQ7 290 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms