RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 OLFML1Q6UWY5 402 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 NHLRC1Q6VVB1 395 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 Q6YL49 198 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 MACC1Q6ZN28 852 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 CFAP77Q6ZQR2 320 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 SPATA31D4Q6ZUB0 917 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 TAOK1Q7L7X3 1001 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 NANOGNBQ7Z5D8 188 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 PPP1R32Q7Z5V6 425 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 SERPINA12Q8IW75 414 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 ABRAQ8N0Z2 381 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 KRT222Q8N1A0 295 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.68□□□□□ -1.82
SF3B1-205ENST00000424674 UXS1Q8NBZ7 420 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 BHLHE23Q8NDY6 225 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 CFAP61Q8NHU2 1237 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 NCOA7Q8NI08 942 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 SUN3Q8TAQ9 357 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 DNAJA4Q8WW22 397 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-205ENST00000424674 SYN2Q92777 582 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-205ENST00000424674 KAT2AQ92830 837 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 LRRC45Q96CN5 670 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 SNRNP40Q96DI7 357 aaKnown RBP3.68□□□□□ -1.82
SF3B1-205ENST00000424674 RNF31Q96EP0 1072 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 ART5Q96L15 291 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 SPATA13Q96N96 652 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 OR2A14Q96R47 310 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 SECISBP2Q96T21 854 aaKnown RBP3.68□□□□□ -1.82
SF3B1-205ENST00000424674 GPA33Q99795 319 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 MYOCQ99972 504 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 H2AFJQ9BTM1 129 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 EDEM2Q9BV94 578 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 GPR61Q9BZJ8 451 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 DDX47Q9H0S4 455 aaKnown RBP3.68□□□□□ -1.82
SF3B1-205ENST00000424674 GLT8D2Q9H1C3 349 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 MMP27Q9H306 513 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 TOR3AQ9H497 397 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 AKIP1Q9NQ31 210 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 LZTFL1Q9NQ48 299 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 ASAH2Q9NR71 780 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 TLR8Q9NR97 1041 aaKnown RBP3.68□□□□□ -1.82
SF3B1-205ENST00000424674 FBXW11Q9UKB1 542 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 PLAGL1Q9UM63 463 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 A4GNTQ9UNA3 340 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 R3HDM2Q9Y2K5 976 aaKnown RBP3.68□□□□□ -1.82
SF3B1-205ENST00000424674 WBP11Q9Y2W2 641 aaKnown RBP3.68□□□□□ -1.82
SF3B1-205ENST00000424674 CMAHPQ9Y471 501 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 COL4A3Q01955 1670 aa3.68□□□□□ -1.82
SF3B1-205ENST00000424674 A0A1B0GVM2 712 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 LNP1A1A4G5 178 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 C5orf52A6NGY3 159 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 TMEM200CA6NKL6 621 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 C3orf70A6NLC5 250 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 USP17L23D6RBM5 183 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 WRBO00258 174 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 HBP1O60381 514 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 TBX19O60806 448 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 CBFA2T3O75081 653 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 WBP4O75554 376 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 SURF6O75683 361 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 SEC31AO94979 1220 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 MFN2O95140 757 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 SMC2O95347 1197 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 MOCS3O95396 460 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 VNN2O95498 520 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 YES1P07947 543 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 RHOP08100 348 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 CALCBP10092 127 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 EPB41P11171 864 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 MMP9P14780 707 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ATP5JP18859 108 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 FDXRP22570 491 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 EEF1B2P24534 225 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 S100A5P33763 92 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 CRKLP46109 303 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 MTNR1AP48039 350 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 KCNJ1P48048 391 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 RPS6KA3P51812 740 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 DGKEP52429 567 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PRKAG1P54619 331 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 GALCP54803 685 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 LOXL3P58215 753 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 RPL15P61313 204 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ABATP80404 500 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 GCNT1Q02742 428 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 GAD2Q05329 585 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 RBPJQ06330 500 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 LCP2Q13094 533 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 SNTB2Q13425 540 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 RUNX2Q13950 521 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 DHX34Q14147 1143 aaKnown RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 PTPRCAPQ14761 206 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 ACOX1Q15067 660 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 UGCGQ16739 394 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 BEAN1Q3B7T3 259 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 SLC36A3Q495N2 470 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 MCMDC2Q4G0Z9 681 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 TAF1BQ53T94 588 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-205ENST00000424674 TMEM196Q5HYL7 178 aa3.67□□□□□ -1.82
SF3B1-205ENST00000424674 RARS2Q5T160 578 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms