RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SCHIP1Q9P0W5 487 aaPredicted RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 VPS18Q9P253 973 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 ABI3Q9P2A4 366 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 EPHA6Q9UF33 1036 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 ADAM21Q9UKJ8 722 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 ATRQ13535 2644 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 C17orf113A0A1B0GUU1 675 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 SLC9B1P1A6NJY1 282 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 IDSB3KWA1 339 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 GOLGA8SH3BPF8 625 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 PSMD11O00231 422 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 SOCS6O14544 535 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 PRRG2O14669 202 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 ARHGEF9O43307 516 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 ZNF749O43361 778 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 DNAJC6O75061 913 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 KLF7O75840 302 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 TSPAN12O95859 305 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 RAF1P04049 648 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 CAPN1P07384 714 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 BRAFP15056 766 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 CTPS1P17812 591 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 TNFAIP3P21580 790 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 CDH3P22223 829 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 IDSP22304 550 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 MSX1P28360 303 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 EPHB2P29323 1055 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 RORAP35398 523 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 KRT9P35527 623 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 NKX6-1P78426 367 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 PMP22Q01453 160 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 RUNX1T1Q06455 604 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 PRKAA1Q13131 559 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 CBLBQ13191 982 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 NFIL3Q16649 462 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 DEFB113Q30KQ7 82 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 TUBB8Q3ZCM7 444 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 PARP15Q460N3 678 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 SHC4Q6S5L8 630 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 IGFL2Q6UWQ7 119 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 CHSY3Q70JA7 882 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 NLRP14Q86W24 1093 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 OOSP2Q86WS3 158 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 ZGRF1Q86YA3 2104 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 DMRTC2Q8IXT2 367 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 D2HGDHQ8N465 521 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 TSEN2Q8NCE0 465 aaKnown RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 OR2Y1Q8NGV0 311 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 ASB5Q8WWX0 329 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 SNX21Q969T3 373 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 CFAP57Q96MR6 1250 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 USP28Q96RU2 1077 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 SECISBP2Q96T21 854 aaKnown RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 CD180Q99467 661 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 TSG101Q99816 390 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 RIOK2Q9BVS4 552 aaKnown RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 TSPAN10Q9H1Z9 355 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 ABCG8Q9H221 673 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 RETREG1Q9H6L5 497 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 RMI1Q9H9A7 625 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 UPF2Q9HAU5 1272 aaKnown RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 SP110Q9HB58 689 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 SLC40A1Q9NP59 571 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 C1GALT1Q9NS00 363 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 HRASLS2Q9NWW9 162 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 PTGFRNQ9P2B2 879 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 ZNF624Q9P2J8 865 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 ARMCX3Q9UH62 379 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 MRPS2Q9Y399 296 aaKnown RBP6.15□□□□□ -1.42
SDCBP-203ENST00000424270 COQ4Q9Y3A0 265 aa6.15□□□□□ -1.42
SDCBP-203ENST00000424270 FN1P02751 2386 aaKnown RBP6.15□□□□□ -1.43
SDCBP-203ENST00000424270 FLNAP21333 2647 aaKnown RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 A0A1W2PQ67 120 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 GSAPA4D1B5 854 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 NPIPB15A6NHN6 443 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 H7C1Q1 480 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 J3KR12 359 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 KLRC4O43908 158 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 LRIG2O94898 1065 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 VCLP18206 1134 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 LHCGRP22888 699 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 RGRP47804 291 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 FMO5P49326 533 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 TNFSF10P50591 281 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 EPHB1P54762 984 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 FOXL2P58012 376 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 YBEYP58557 167 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 AP1S1P61966 158 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 DCDP81605 110 aaKnown RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 ALDH6A1Q02252 535 aaKnown RBP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 DPTQ07507 201 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 PCBP2Q15366 365 aaKnown RBP eCLIP6.14□□□□□ -1.43
SDCBP-203ENST00000424270 RBBP7Q16576 425 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 MEA1Q16626 185 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 LRRC66Q68CR7 880 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 PODNL1Q6PEZ8 512 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 FBXO38Q6PIJ6 1188 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 RFLNAQ6ZTI6 216 aa6.14□□□□□ -1.43
SDCBP-203ENST00000424270 TSPAN33Q86UF1 283 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms