RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 KIAA0040Q15053 153 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 TAF1AQ15573 450 aaPredicted RBP15.04■□□□□ -0
C9orf3-204ENST00000424143 TRIP4Q15650 581 aaPredicted RBP15.04■□□□□ -0
C9orf3-204ENST00000424143 C5orf22Q49AR2 442 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 OVOS1Q6IE37 1185 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 METTL2BQ6P1Q9 378 aaKnown RBP15.04■□□□□ -0
C9orf3-204ENST00000424143 GALNT18Q6P9A2 607 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 Q6ZSR9 355 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 TLK2Q86UE8 772 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 IGFN1Q86VF2 1251 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 OR2T11Q8NH01 316 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 EXT2Q93063 718 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 PSMG2Q969U7 264 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 FUBP3Q96I24 572 aaKnown RBP eCLIP15.04■□□□□ -0
C9orf3-204ENST00000424143 CEP295NLQ96MC4 621 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 ZNF583Q96ND8 569 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 TMEM74Q96NL1 305 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 CSF3RQ99062 836 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 SEPHS2Q99611 448 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 SEMA3CQ99985 751 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 TOR3AQ9H497 397 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 SEMA4BQ9NPR2 832 aaPredicted RBP15.04■□□□□ -0
C9orf3-204ENST00000424143 AKIP1Q9NQ31 210 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 NECTIN3Q9NQS3 549 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 FBXO8Q9NRD0 319 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 OLA1Q9NTK5 396 aaKnown RBP15.04■□□□□ -0
C9orf3-204ENST00000424143 SELENONQ9NZV5 590 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 ST3GAL5Q9UNP4 418 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 ERVW-1Q9UQF0 538 aa15.04■□□□□ -0
C9orf3-204ENST00000424143 A0A1W2PQH9 124 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 FAM92AA1XBS5 289 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 SLC22A1O15245 554 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 RAMP2O60895 175 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 BCAS1O75363 584 aaPredicted RBP15.03■□□□□ -0
C9orf3-204ENST00000424143 VPS26AO75436 327 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 RSL1D1O76021 490 aaKnown RBP15.03■□□□□ -0
C9orf3-204ENST00000424143 ARHGEF15O94989 841 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 TSPAN12O95859 305 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 ETFBP38117 255 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 MAXP61244 160 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 TRIM32Q13049 653 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 POLD3Q15054 466 aaPredicted RBP15.03■□□□□ -0
C9orf3-204ENST00000424143 TSNQ15631 228 aaKnown RBP15.03■□□□□ -0
C9orf3-204ENST00000424143 TIGD2Q4W5G0 525 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 PYCR3Q53H96 274 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 EGFLAMQ63HQ2 1017 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 SLC16A12Q6ZSM3 486 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 MOB2Q70IA6 237 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 ITIH5Q86UX2 942 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 STK32CQ86UX6 486 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 CLEC4FQ8N1N0 589 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 OR5K1Q8NHB7 308 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 NPLOC4Q8TAT6 608 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 PPP3R2Q96LZ3 170 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 CCDC138Q96M89 665 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 KLHL5Q96PQ7 755 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 MBOAT4Q96T53 435 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 PDFQ9HBH1 243 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 C3orf18Q9UK00 162 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 PCDHB8Q9UN66 801 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 SH3BP1Q9Y3L3 701 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 CORINQ9Y5Q5 1042 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 SNX5Q9Y5X3 404 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 CPQQ9Y646 472 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 CHD5Q8TDI0 1954 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 A0A1B0GTL3 188 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 MEIS3P2A8K0S8 358 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 E2F3O00716 465 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 NDUFS3O75489 264 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 GABARAPO95166 117 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 IGLV3-27P01718 113 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 SERPINF2P08697 491 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 TFPTP0C1Z6 253 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 ZNF865P0CJ78 1059 aaPredicted RBP15.03■□□□□ -0
C9orf3-204ENST00000424143 PKMP14618 531 aaKnown RBP15.03■□□□□ -0
C9orf3-204ENST00000424143 PCMT1P22061 227 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 GRK3P35626 688 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 MTHFRP42898 656 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 ISL1P61371 349 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 RING1Q06587 406 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 MAD2L1Q13257 205 aaPredicted RBP15.03■□□□□ -0
C9orf3-204ENST00000424143 FAM110CQ1W6H9 321 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 FUT11Q495W5 492 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 ZNF691Q5VV52 312 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 TMEM214Q6NUQ4 689 aaKnown RBP15.03■□□□□ -0
C9orf3-204ENST00000424143 CRTC3Q6UUV7 619 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 USP50Q70EL3 339 aaPredicted RBP15.03■□□□□ -0
C9orf3-204ENST00000424143 GPSM1Q86YR5 675 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 ADHFE1Q8IWW8 467 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 CPNE9Q8IYJ1 553 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 SLC10A4Q96EP9 437 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 MGME1Q9BQP7 344 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 TRIT1Q9H3H1 467 aaKnown RBP15.03■□□□□ -0
C9orf3-204ENST00000424143 SLAMF8Q9P0V8 285 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 TIMM22Q9Y584 194 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 PCDHGA8Q9Y5G5 932 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 ARL5AQ9Y689 179 aa15.03■□□□□ -0
C9orf3-204ENST00000424143 MYO16Q9Y6X6 1858 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 GPR182O15218 404 aa15.02□□□□□ -0.01
C9orf3-204ENST00000424143 FOXD2O60548 495 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms