RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 OR56A4Q8NGH8 313 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 OR10A6Q8NH74 314 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 ABTB1Q969K4 478 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 ITCHQ96J02 903 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 ZFYVE1Q9HBF4 777 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 KDELR3O43731 214 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 AHCYL1O43865 530 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 TNFAIP8O95379 198 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 UGT2B4P06133 528 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 IRX1P78414 480 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 PGS1Q32NB8 556 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 HIC2Q96JB3 615 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 CORO1BQ9BR76 489 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 ZNF334Q9HCZ1 680 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 SLCO3A1Q9UIG8 710 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 MBD1Q9UIS9 605 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 PCTPQ9UKL6 214 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 PIKFYVEQ9Y2I7 2098 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 ZFC3H1O60293 1989 aaKnown RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 H7C4K7 107 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 HTRA2O43464 458 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 MAGEA11P43364 429 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 TUFMP49411 452 aaKnown RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 BCL2L1Q07817 233 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 BTG3Q14201 252 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 FAM174BQ3ZCQ3 159 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 LHX8Q68G74 356 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 NANOGP8Q6NSW7 305 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 KIAA2013Q8IYS2 634 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 SFRP1Q8N474 314 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 TRIB3Q96RU7 358 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 NANOGQ9H9S0 305 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 GID8Q9NWU2 228 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 ZNF711Q9Y462 761 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 OR2AG2A6NM03 316 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 NRG2O14511 850 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 PRMT5O14744 637 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 DFNA5O60443 496 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 DIRAS1O95057 198 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 SNAP29O95721 258 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 HMGA1P17096 107 aaKnown RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 FASP25445 335 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 CD70P32970 193 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 RPL5P46777 297 aaKnown RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 TTPAP49638 278 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 CBX2Q14781 532 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 BEND5Q7L4P6 421 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 CLVS1Q8IUQ0 354 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 TFB2MQ9H5Q4 396 aaKnown RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 SMOXQ9NWM0 555 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 LCHNA4D1U4 455 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 SYCE1LA8MT33 242 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 H3BNC9 293 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 FXYD1O00168 92 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 INPPL1O15357 1258 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 CD160O95971 181 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 C1QCP02747 245 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 FAM189BP81408 668 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 INPP5AQ14642 412 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 PYCR3Q53H96 274 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 GOLGA7Q7Z5G4 137 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 CCDC117Q8IWD4 279 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 FAM86B1Q8N7N1 296 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 SCAMP4Q969E2 229 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 L3HYPDHQ96EM0 354 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 RMND5BQ96G75 393 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 MYO19Q96H55 970 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 TRMOQ9BU70 441 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 EBPLQ9BY08 206 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 ABCB8Q9NUT2 735 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 TMEM181Q9P2C4 612 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 LIMD1Q9UGP4 676 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 CASQ2O14958 399 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 FFAR2O15552 330 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 HTR7P34969 479 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 ROR2Q01974 943 aaKnown RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 TLE2Q04725 743 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 GTF2H2Q13888 395 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 HERC3Q15034 1050 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 TCEA2Q15560 299 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 GLYATQ6IB77 296 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 GTF2H2CQ6P1K8 395 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 Q6ZSR9 355 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 SCML4Q8N228 414 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 C2orf73Q8N5S3 287 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-213ENST00000421756 DLG3Q92796 817 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 TRAPPC9Q96Q05 1148 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 ACTR8Q9H981 624 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 HCFC1R1Q9NWW0 138 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 SH3BP1Q9Y3L3 701 aa13.16□□□□□ -0.3
MCF2L-213ENST00000421756 CLOCKO15516 846 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 HNRNPRO43390 633 aaKnown RBP13.15□□□□□ -0.3
MCF2L-213ENST00000421756 ZNF189O75820 626 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-213ENST00000421756 ESRRBO95718 433 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 HNF1BP35680 557 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 DEFB103AP81534 67 aa13.15□□□□□ -0.3
MCF2L-213ENST00000421756 BFSP2Q13515 415 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms