RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ATXN1LP0C7T5 689 aaKnown RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 ELFN1P0C7U0 828 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 ZFXP17010 805 aaPredicted RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 DGKAP23743 735 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 CCNCP24863 283 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 CDKN2BP42772 138 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 MARCKSL1P49006 195 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 THOP1P52888 689 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 POLR2LP62875 67 aaKnown RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 DYNLT1P63172 113 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 IRF9Q00978 393 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 DSC2Q02487 901 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 PPIDQ08752 370 aaKnown RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 TAZQ16635 292 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 WSCD2Q2TBF2 565 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 ODF2Q5BJF6 829 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 ZNF542PQ5EBM4 170 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 XP32Q5T750 250 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 CPZQ66K79 652 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 FKBP9P1Q75LS8 142 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 RFX6Q8HWS3 928 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 TMEM139Q8IV31 216 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 CCDC13Q8IYE1 715 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 SLC25A45Q8N413 288 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 EID2Q8N6I1 236 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 SPC24Q8NBT2 197 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 ACRBPQ8NEB7 543 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 PDCD6IPQ8WUM4 868 aaKnown RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 ADAMTS14Q8WXS8 1223 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 PEX11GQ96HA9 241 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 CNDP2Q96KP4 475 aaKnown RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 OLFM3Q96PB7 478 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 LGMNQ99538 433 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 BAG1Q99933 345 aaPredicted RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 SEMA3CQ99985 751 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 SCNM1Q9BWG6 230 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 TDRD1Q9BXT4 1180 aaKnown RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 NT5MQ9NPB1 228 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 RBM22Q9NW64 420 aaKnown RBP eCLIP6.92□□□□□ -1.33e-6■■□□□ 13.5
HMGN1-205ENST00000419378 OXSMQ9NWU1 459 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 UCKL1Q9NWZ5 548 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 DNAJC28Q9NX36 388 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 H2AFY2Q9P0M6 372 aaPredicted RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 MYOTQ9UBF9 498 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 AMACRQ9UHK6 382 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 KLK13Q9UKR3 277 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 APOBEC2Q9Y235 224 aaKnown RBP6.92□□□□□ -1.3
HMGN1-205ENST00000419378 HEY1Q9Y5J3 304 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 ALG6Q9Y672 507 aa6.92□□□□□ -1.3
HMGN1-205ENST00000419378 DMXL2Q8TDJ6 3036 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 NPIPB15A6NHN6 443 aaPredicted RBP6.91□□□□□ -1.3
HMGN1-205ENST00000419378 A8MX80 341 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 KCNK1O00180 336 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 SCDO00767 359 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 TOR1BO14657 336 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 FFAR2O15552 330 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 GPR39O43194 453 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 PIAS2O75928 621 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 NEBLO76041 1014 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 RECQL5O94762 991 aaPredicted RBP6.91□□□□□ -1.3
HMGN1-205ENST00000419378 LDOC1O95751 146 aaPredicted RBP6.91□□□□□ -1.3
HMGN1-205ENST00000419378 CSF2P04141 144 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 PCCBP05166 539 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 GIMD1P0DJR0 217 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 CCNB1P14635 433 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 PECAM1P16284 738 aaPredicted RBP6.91□□□□□ -1.3
HMGN1-205ENST00000419378 GM2AP17900 193 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 LHCGRP22888 699 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 VIPR1P32241 457 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 YPEL5P62699 121 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 IFI35P80217 286 aaPredicted RBP6.91□□□□□ -1.3
HMGN1-205ENST00000419378 PRR5P85299 388 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 TMPRSS15P98073 1019 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 ITKQ08881 620 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 NIPAL4Q0D2K0 466 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 AP1B1Q10567 949 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 ZBTB17Q13105 803 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 EIF2B5Q13144 721 aaKnown RBP6.91□□□□□ -1.3
HMGN1-205ENST00000419378 DNAJC3Q13217 504 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 PTK2BQ14289 1009 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 IHHQ14623 411 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 NFATC4Q14934 902 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 PDK1Q15118 436 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 CNGA3Q16281 694 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 TFDP3Q5H9I0 405 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 ARMC12Q5T9G4 340 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 MFSD7Q6UXD7 560 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 NPNTQ6UXI9 565 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 RPTNQ6XPR3 784 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 LIPIQ6XZB0 460 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 SPOCD1Q6ZMY3 1216 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 MACC1Q6ZN28 852 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 MILR1Q7Z6M3 343 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 DAAM2Q86T65 1068 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 KATNAL2Q8IYT4 538 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 RBFAQ8N0V3 343 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 NLGN4XQ8N0W4 816 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 CHCHD4Q8N4Q1 142 aa6.91□□□□□ -1.3
HMGN1-205ENST00000419378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.91□□□□□ -1.3
HMGN1-205ENST00000419378 CCNYQ8ND76 341 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms