RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SAMD14Q8IZD0 417 aaPredicted RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 NEXN-AS1Q8NBZ9 246 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 C1orf131Q8NDD1 294 aaKnown RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 AGBL3Q8NEM8 1001 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 HUS1BQ8NHY5 278 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 FAM76AQ8TAV0 307 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 SPATA20Q8TB22 786 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 NEK9Q8TD19 979 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 ELP5Q8TE02 316 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 FAM216AQ8WUB2 273 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 PSPC1Q8WXF1 523 aaKnown RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 PHF21BQ96EK2 531 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 THOC3Q96J01 351 aaKnown RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 ZNF479Q96JC4 524 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 SLITRK1Q96PX8 696 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 GSDMAQ96QA5 445 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 ZPBPQ9BS86 351 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 CRACR2AQ9BSW2 395 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 STRA6Q9BX79 667 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 TSGA10Q9BZW7 698 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 FTOQ9C0B1 505 aaKnown RBP eCLIP2.68□□□□□ -1.98
VPS41-206ENST00000418457 UBA5Q9GZZ9 404 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 MAF1Q9H063 256 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 TKTL2Q9H0I9 626 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 HAUS4Q9H6D7 363 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 KRT84Q9NSB2 600 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 RMND1Q9NWS8 449 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 GGA2Q9UJY4 613 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 FBXO9Q9UK97 447 aaPredicted RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 CDC14AQ9UNH5 594 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 ERVK-11Q9UQG0 969 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 CLIC4Q9Y696 253 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 KCNE2Q9Y6J6 123 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 BCL9LQ86UU0 1499 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 MYH2Q9UKX2 1941 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 PKD1L3Q7Z443 1732 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 LRP6O75581 1613 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 MROH7-TTC4A0A0A0MT08 1334 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 SYNRGQ9UMZ2 1314 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 RREB1Q92766 1687 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 A0A1W2PRG0 241 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 F5H0A9 414 aaPredicted RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 ZBTB43O43298 467 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 SMAD6O43541 496 aaKnown RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 ZIC3O60481 467 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 BAIAP3O94812 1187 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 SCGB1D1O95968 90 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 IGKV5-2P06315 115 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 ACAA1P09110 424 aaPredicted RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 T-ENOLP0DO92 83 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 EPB41P11171 864 aaKnown RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 PRLRP16471 622 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 IFNAR1P17181 557 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 NFKBIAP25963 317 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 TNFRSF8P28908 595 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 HNRNPH1P31943 449 aaKnown RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 CYLC1P35663 651 aaPredicted RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 PBX3P40426 434 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 NT5C2P49902 561 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 NANOS2P60321 138 aaKnown RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 DCAF7P61962 342 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 VSNL1P62760 191 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 LTBQ06643 244 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 CSTF3Q12996 717 aaKnown RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 OLIG2Q13516 323 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 PNOCQ13519 176 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 KARSQ15046 597 aaKnown RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 C2orf68Q2NKX9 166 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 USP41Q3LFD5 358 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 PPP6R3Q5H9R7 873 aaPredicted RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 C6orf141Q5SZD1 244 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 LRCH2Q5VUJ6 765 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 ALS2CLQ60I27 953 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 EMBQ6PCB8 327 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 ZNF790Q6PG37 636 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 QSOX2Q6ZRP7 698 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 C1orf122Q6ZSJ8 110 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 MTSS1LQ765P7 747 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 ARMC9Q7Z3E5 817 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 PXKQ7Z7A4 578 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 TBC1D1Q86TI0 1168 aaPredicted RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 CCDC50Q8IVM0 306 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 CCDC170Q8IYT3 715 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 CNPY4Q8N129 248 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 ADSSL1Q8N142 457 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 TMTC2Q8N394 836 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 CLIP4Q8N3C7 705 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 ARFGAP2Q8N6H7 521 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 FRMD1Q8N878 549 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 TMEM116Q8NCL8 245 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.67□□□□□ -1.986e-6■■■■■ 28.1
VPS41-206ENST00000418457 P3H4Q92791 437 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 NEUROG1Q92886 237 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 ZNF622Q969S3 477 aaKnown RBP eCLIP2.67□□□□□ -1.985e-7■■□□□ 14.4
VPS41-206ENST00000418457 MMABQ96EY8 250 aaPredicted RBP2.67□□□□□ -1.98
VPS41-206ENST00000418457 PERPQ96FX8 193 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 SLC41A2Q96JW4 573 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 CABS1Q96KC9 395 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 MARK4Q96L34 752 aa2.67□□□□□ -1.98
VPS41-206ENST00000418457 RUFY1Q96T51 708 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms