RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TMPRSS4Q9NRS4 437 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 FKBP14Q9NWM8 211 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 UBP1Q9NZI7 540 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 NUP205Q92621 2012 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 A0A0G2JMP0 313 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 AZIN1O14977 448 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 MAFO75444 373 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 MYCP01106 439 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CHRNA5P30532 468 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 FMO3P31513 532 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CYP2C18P33260 490 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CDH13P55290 713 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 FOXA1P55317 472 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 NFKB2Q00653 900 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 KANK2Q63ZY3 851 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 TWF2Q6IBS0 349 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ESRP1Q6NXG1 681 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 HORMAD1Q86X24 394 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 HID1Q8IV36 788 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ABI1Q8IZP0 508 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM86B1Q8N7N1 296 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 RNF149Q8NC42 400 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 SETD9Q8NE22 299 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 FRS2Q8WU20 508 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 UGT2B28Q9BY64 529 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CDT1Q9H211 546 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CARS2Q9HA77 564 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ATP13A2Q9NQ11 1180 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ACOXLQ9NUZ1 547 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 SCN3BQ9NY72 215 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 TAS2R9Q9NYW1 312 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 EHD3Q9NZN3 535 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 FBXO10Q9UK96 956 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 MKLN1Q9UL63 735 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 KCNH4Q9UQ05 1017 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 OR2A25A4D2G3 310 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 AP3D1O14617 1153 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 NCAM2O15394 837 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 MRPS14O60783 128 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CD4P01730 458 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 YES1P07947 543 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ITGAMP11215 1152 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 GGT1P19440 569 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CASP2P42575 452 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 HSPA14Q0VDF9 509 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 LAMTOR4Q0VGL1 99 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 STARD3Q14849 445 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC14A2Q15849 920 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 RFX4Q33E94 735 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 MICU2Q8IYU8 434 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 RIPOR3Q96MK2 946 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CDADC1Q9BWV3 514 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF717Q9BY31 904 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 NUAK2Q9H093 628 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ZFP14Q9HCL3 533 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 SMPD4Q9NXE4 827 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 TMEFF2Q9UIK5 374 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 A0A0X1KG70 313 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 A8MV72 311 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ACKR2O00590 384 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 RGS10O43665 173 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 USP2O75604 605 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 GOT2P00505 430 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CYBBP04839 570 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 TRAPPC2P0DI81 140 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 TRAPPC2BP0DI82 140 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 POLR2CP19387 275 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CYP2A7P20853 494 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ETV6P41212 452 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 MATKP42679 507 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 SP2Q02086 613 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 GALNT3Q14435 633 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 MXD4Q14582 209 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC25A52Q3SY17 297 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 TBRG1Q3YBR2 411 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 KIAA0319Q5VV43 1072 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 PDZD4Q76G19 769 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ACOT1Q86TX2 421 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 RIOX2Q8IUF8 465 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 DEPDC4Q8N2C3 294 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 NSUN6Q8TEA1 469 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 ANKRD49Q8WVL7 239 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC38A4Q969I6 547 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 VPS35Q96QK1 796 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CITED4Q96RK1 184 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 GMLQ99445 158 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 MID1IP1Q9NPA3 183 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 CCNB1IP1Q9NPC3 277 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 DPP3Q9NY33 737 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 PCDHB14Q9Y5E9 798 aa7.93□□□□□ -1.14
HMGXB4-202ENST00000418170 A0A087WZ62 844 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 CLRN2A0PK11 232 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 PPP6CO00743 305 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 DSCR3O14972 297 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 B4GALT5O43286 388 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 AIREO43918 545 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 VPS4BO75351 444 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 FTH1P02794 183 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 LINC00032P0C843 101 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 HOXD8P13378 290 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms