RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PFDN4Q9NQP4 134 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 GIN1Q9NXP7 522 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 TRIM10Q9UDY6 481 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 RASAL2Q9UJF2 1139 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 DNM3Q9UQ16 869 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 HBS1LQ9Y450 684 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 U3KQA8 63 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF638Q14966 1978 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SDK2Q58EX2 2172 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 DENND4CQ5VZ89 1909 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SCO2A0A1W2PP80 73 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 PRRT4C9JH25 899 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 E9PBE3 544 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 NPC1O15118 1278 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 CETN3O15182 167 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 STX6O43752 255 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 GUCY1B2O75343 617 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 RNASEH2AO75792 299 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 NOL4O94818 638 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SORBS2O94875 1100 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 TJP3O95049 919 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 RPN1P04843 607 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 PRKAR1AP10644 381 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 HGFP14210 728 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 IDEP14735 1019 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 LIFP15018 202 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 NQO1P15559 274 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 PFKLP17858 780 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 PDCP20941 246 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 DGKAP23743 735 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 PSMA4P25789 261 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 CETN2P41208 172 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 HARS2P49590 506 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 NAPAP54920 295 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 GNG11P61952 73 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 AP2B1P63010 937 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 IL13RA1P78552 427 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SMARCB1Q12824 385 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 STK4Q13043 487 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 MRPL28Q13084 256 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 INPP5JQ15735 1006 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 ME3Q16798 604 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 PARP6Q2NL67 630 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 CNPY1Q3B7I2 92 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 MCMDC2Q4G0Z9 681 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 LIN52Q52LA3 116 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 PRR30Q53SZ7 412 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SPDYAQ5MJ70 313 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SNX30Q5VWJ9 437 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 KANK2Q63ZY3 851 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 FAM171BQ6P995 826 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 DHRS4L2Q6PKH6 230 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 LIMS2Q7Z4I7 341 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF589Q86UQ0 364 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 TMEM139Q8IV31 216 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 ZBED8Q8IZ13 594 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 NAGSQ8N159 534 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 BBS5Q8N3I7 341 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SLC25A45Q8N413 288 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 PRR18Q8N4B5 295 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 AADATQ8N5Z0 425 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF713Q8N859 430 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 CCDC89Q8N998 374 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 ANKRD53Q8N9V6 530 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 OR10T2Q8NGX3 314 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 OR14C36Q8NHC7 312 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 WDR48Q8TAF3 677 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 C18orf25Q96B23 403 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 LENG9Q96B70 501 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 OTUB2Q96DC9 234 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 EGLN2Q96KS0 407 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 RPRD1AQ96P16 312 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 RAB3IPQ96QF0 476 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 CTRCQ99895 268 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 DHRS9Q9BPW9 319 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SELENOOQ9BVL4 669 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SARGQ9BW04 601 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SHCBP1LQ9BZQ2 653 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 IMPG2Q9BZV3 1241 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 B3GNT4Q9C0J1 378 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 STRADBQ9C0K7 418 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 NDEL1Q9GZM8 345 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 OR10A5Q9H207 317 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SYNDIG1Q9H7V2 258 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SGK2Q9HBY8 427 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 XAB2Q9HCS7 855 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 GJB4Q9NTQ9 266 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 SEPT11Q9NVA2 429 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 RRN3Q9NYV6 651 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 NLGN3Q9NZ94 848 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 FOXJ2Q9P0K8 574 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 CFAP97Q9P2B7 532 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 MBD2Q9UBB5 411 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 KCND3Q9UK17 655 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 KIAA1257Q9ULG3 409 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 LIMCH1Q9UPQ0 1083 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 TSC22D4Q9Y3Q8 395 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 CPQQ9Y646 472 aa5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 OAS3Q9Y6K5 1087 aaKnown RBP5.49□□□□□ -1.53
ECHDC1-206ENST00000417628 BAZ2BQ9UIF8 2168 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms