RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PRKG2Q13237 762 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 C16orf72Q14CZ0 275 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 ABRAXAS2Q15018 415 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 ANKRD34AQ69YU3 496 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 PRSS55Q6UWB4 352 aaPredicted RBP14.3□□□□□ -0.12
HDAC9-208ENST00000417496 PATL1Q86TB9 770 aaKnown RBP14.3□□□□□ -0.12
HDAC9-208ENST00000417496 EGFL6Q8IUX8 553 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 TBC1D21Q8IYX1 336 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 BBS5Q8N3I7 341 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 TNIP2Q8NFZ5 429 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 SGCDQ92629 289 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 BHMTQ93088 406 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 EID2BQ96D98 161 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 MAGEH1Q9H213 219 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 TLR9Q9NR96 1032 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 UTS2RQ9UKP6 389 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 COMMD10Q9Y6G5 202 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 FAM234BA2RU67 622 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 STX7O15400 261 aaKnown RBP14.3□□□□□ -0.12
HDAC9-208ENST00000417496 ADAM12O43184 909 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 TFPTP0C1Z6 253 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 IRF1P10914 325 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 RPL17P18621 184 aaKnown RBP14.3□□□□□ -0.12
HDAC9-208ENST00000417496 PAX3P23760 479 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 CAP1Q01518 475 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 EMX2Q04743 252 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 TWF1Q12792 350 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 NR6A1Q15406 480 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 ZFAND4Q86XD8 727 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 HID1Q8IV36 788 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 NAT16Q8N8M0 369 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 OR4F6Q8NGB9 312 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 SNRNP27Q8WVK2 155 aaKnown RBP14.3□□□□□ -0.12
HDAC9-208ENST00000417496 WBP2Q969T9 261 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 LRRC3Q9BY71 257 aa14.3□□□□□ -0.12
HDAC9-208ENST00000417496 CARS2Q9HA77 564 aaKnown RBP14.3□□□□□ -0.12
HDAC9-208ENST00000417496 FAF1Q9UNN5 650 aaPredicted RBP14.3□□□□□ -0.12
HDAC9-208ENST00000417496 TRIM64CA6NLI5 447 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 GOLGA8CPA6NN73 597 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 H3BMQ9 156 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 FFAR3O14843 346 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 GPR42O15529 346 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 CTPS1P17812 591 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 EEF1B2P24534 225 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 NFKBIAP25963 317 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 TRAF2Q12933 501 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 PTGR1Q14914 329 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 ELMSAN1Q6PJG2 1045 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 CYP20A1Q6UW02 462 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 FAM126BQ8IXS8 530 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 HS3ST5Q8IZT8 346 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 LRRC43Q8N309 656 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 OR6K2Q8NGY2 324 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 ISG20Q96AZ6 181 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 NSMCE2Q96MF7 247 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 COG8Q96MW5 612 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 ZIC5Q96T25 663 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 C1QTNF3Q9BXJ4 246 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 NUSAP1Q9BXS6 441 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 NSUN3Q9H649 340 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 TDRKHQ9Y2W6 561 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 POLR3HQ9Y535 204 aaPredicted RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 TRIM64A6NGJ6 449 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 INPPL1O15357 1258 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 KDELR3O43731 214 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 EOMESO95936 686 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 F11P03951 625 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 FCGR1AP12314 374 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 ATP5C1P36542 298 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 EEFSECP57772 596 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 PRKCZQ05513 592 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 LAPTM5Q13571 262 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 MRPL58Q14197 206 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 AP5B1Q2VPB7 878 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 PDCD4Q53EL6 469 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 CCSAPQ6IQ19 270 aaPredicted RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 DUS1LQ6P1R4 473 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 TXNDC11Q6PKC3 985 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 XKR5Q6UX68 686 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 DNAJC14Q6Y2X3 702 aaPredicted RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 CLDN19Q8N6F1 224 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 GOLM1Q8NBJ4 401 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 PAPD5Q8NDF8 572 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 TSPEARQ8WU66 669 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 FARSBQ9NSD9 589 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 RIC8BQ9NVN3 520 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 TUBA8Q9NY65 449 aaPredicted RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 PTBP2Q9UKA9 531 aaKnown RBP14.29□□□□□ -0.12
HDAC9-208ENST00000417496 RIMKLBQ9ULI2 386 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 PCDHB9Q9Y5E1 797 aa14.29□□□□□ -0.12
HDAC9-208ENST00000417496 VWA8A3KMH1 1905 aa14.28□□□□□ -0.12
HDAC9-208ENST00000417496 TMEM189-UBE2V1I3L0A0 370 aa14.28□□□□□ -0.12
HDAC9-208ENST00000417496 UPK1AO00322 258 aa14.28□□□□□ -0.12
HDAC9-208ENST00000417496 OR7A17O14581 309 aa14.28□□□□□ -0.12
HDAC9-208ENST00000417496 DFNA5O60443 496 aa14.28□□□□□ -0.12
HDAC9-208ENST00000417496 RHOCP08134 193 aa14.28□□□□□ -0.12
HDAC9-208ENST00000417496 ENO2P09104 434 aaPredicted RBP14.28□□□□□ -0.12
HDAC9-208ENST00000417496 ALPIP09923 528 aa14.28□□□□□ -0.12
HDAC9-208ENST00000417496 TTPAP49638 278 aa14.28□□□□□ -0.12
HDAC9-208ENST00000417496 CLCN7P51798 805 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms