RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 NDST3O95803 873 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 CLDN1O95832 211 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 HOXC4P09017 264 aaPredicted RBP17.73■□□□□ 0.43
VCP-202ENST00000417448 KELP23276 732 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 TERF1P54274 439 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 MC1RQ01726 317 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 CCNG2Q16589 344 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 ITPRIPL1Q6GPH6 555 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 LYSMD3Q7Z3D4 306 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 CBARPQ8N350 705 aaPredicted RBP17.73■□□□□ 0.43
VCP-202ENST00000417448 CPT1CQ8TCG5 803 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 EID2BQ96D98 161 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 CAPZA3Q96KX2 299 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 FERMT1Q9BQL6 677 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 ADGRE3Q9BY15 652 aa17.73■□□□□ 0.43
VCP-202ENST00000417448 CARS2Q9HA77 564 aaKnown RBP17.73■□□□□ 0.43
VCP-202ENST00000417448 CUEDC1Q9NWM3 386 aaPredicted RBP17.73■□□□□ 0.43
VCP-202ENST00000417448 TMEM184BQ9Y519 407 aaPredicted RBP17.73■□□□□ 0.43
VCP-202ENST00000417448 C1orf232A0A0U1RR37 186 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 LOC285095A0A1B0GVY8 99 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 GOLGA6CA6NDK9 693 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 GOLGA6BA6NDN3 693 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 TTLL8A6PVC2 850 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 MKRN2OSH3BPM6 223 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 BUD23O43709 281 aaKnown RBP17.72■□□□□ 0.43
VCP-202ENST00000417448 STK17BO94768 372 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 DLGAP3O95886 979 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 GOLGA6DP0CG33 693 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 MSNP26038 577 aaKnown RBP17.72■□□□□ 0.43
VCP-202ENST00000417448 STAT5AP42229 794 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 GEMP55040 296 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 TRIP13Q15645 432 aaPredicted RBP17.72■□□□□ 0.43
VCP-202ENST00000417448 TTC27Q6P3X3 843 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 TMEM71Q6P5X7 295 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 SLC30A9Q6PML9 568 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 NDUFAF2Q8N183 169 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 EFCAB3Q8N7B9 438 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 SCAMP4Q969E2 229 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 AGAP2Q99490 1192 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 GSDMCQ9BYG8 508 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 WDR26Q9H7D7 661 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 PIH1D1Q9NWS0 290 aaKnown RBP17.72■□□□□ 0.43
VCP-202ENST00000417448 GOLGA6AQ9NYA3 693 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 PDP2Q9P2J9 529 aa17.72■□□□□ 0.43
VCP-202ENST00000417448 ZW10O43264 779 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 TNFRSF8P28908 595 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 STC1P52823 247 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 RPL26P61254 145 aaKnown RBP17.71■□□□□ 0.43
VCP-202ENST00000417448 MC2RQ01718 297 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 MPP3Q13368 585 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 PRPSAP1Q14558 356 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 PTPRCAPQ14761 206 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 SLC1A5Q15758 541 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 CCDC70Q6NSX1 233 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 MICALCLQ6ZW33 695 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 TECPR1Q7Z6L1 1165 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 TMEM135Q86UB9 458 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 ZNF761Q86XN6 746 aaPredicted RBP17.71■□□□□ 0.43
VCP-202ENST00000417448 MAIP1Q8WWC4 291 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 NUS1Q96E22 293 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 RNF31Q96EP0 1072 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 NAPGQ99747 312 aaPredicted RBP17.71■□□□□ 0.43
VCP-202ENST00000417448 ABCG8Q9H221 673 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 BPIFA1Q9NP55 256 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 TLK1Q9UKI8 766 aa17.71■□□□□ 0.43
VCP-202ENST00000417448 RPL26L1Q9UNX3 145 aaKnown RBP17.71■□□□□ 0.43
VCP-202ENST00000417448 CFAP69A5D8W1 941 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 A8MU76 341 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 PGRMC1O00264 195 aaKnown RBP17.7■□□□□ 0.42
VCP-202ENST00000417448 ANXA9O76027 345 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 CEACAM5P06731 702 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 TPH1P17752 444 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 RPL22P35268 128 aaKnown RBP17.7■□□□□ 0.42
VCP-202ENST00000417448 ADRA1AP35348 466 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 ILF3Q12906 894 aaKnown RBP eCLIP17.7■□□□□ 0.42
VCP-202ENST00000417448 BIRC2Q13490 618 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 SLC14A2Q15849 920 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 PARP6Q2NL67 630 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 PNCKQ6P2M8 343 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 CEACAM20Q6UY09 585 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 GSTA5Q7RTV2 222 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 MAMDC2Q7Z304 686 aaPredicted RBP17.7■□□□□ 0.42
VCP-202ENST00000417448 ARHGAP22Q7Z5H3 698 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 BLOC1S5Q8TDH9 187 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 MAGOHBQ96A72 148 aaKnown RBP17.7■□□□□ 0.42
VCP-202ENST00000417448 DTD2Q96FN9 168 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 FSD1LQ9BXM9 530 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 FRMD8P1Q9BZ68 369 aaPredicted RBP17.7■□□□□ 0.42
VCP-202ENST00000417448 GPR63Q9BZJ6 419 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 ETNK1Q9HBU6 452 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 DRG1Q9Y295 367 aaKnown RBP17.7■□□□□ 0.42
VCP-202ENST00000417448 ZNF711Q9Y462 761 aa17.7■□□□□ 0.42
VCP-202ENST00000417448 MYCLP1P12525 358 aaPredicted RBP17.69■□□□□ 0.42
VCP-202ENST00000417448 NFKBIAP25963 317 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 STIP1P31948 543 aaKnown RBP17.69■□□□□ 0.42
VCP-202ENST00000417448 GNPDA1P46926 289 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 VPS41P49754 854 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 SNAP47Q5SQN1 464 aa17.69■□□□□ 0.42
VCP-202ENST00000417448 PAPD7Q5XG87 772 aaKnown RBP17.69■□□□□ 0.42
VCP-202ENST00000417448 ALS2CLQ60I27 953 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 559 ms