RNA–Protein interactions for RNA: ENST00000417295.6

SH3GL1-202, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 2 BASIC

Gene SH3GL1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-202ENST00000417295 RDH14Q9HBH5 336 aa28.09■■■□□ 2.09
SH3GL1-202ENST00000417295 KNTC1P50748 2209 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 MGAT4DA6NG13 374 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 OR52A4PA6NMU1 304 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 CD1CP29017 333 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 SLC19A1P41440 591 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 PTK6Q13882 451 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 AGAP9Q5VTM2 703 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 NKAIN2Q5VXU1 208 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 CES3Q6UWW8 571 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 USP53Q70EK8 1073 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 OR4L1Q8NH43 312 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 MFSD3Q96ES6 412 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 SLC38A3Q99624 504 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 NRSN2Q9GZP1 204 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 KCNK4Q9NYG8 393 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 RNF14Q9UBS8 474 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 FAM8A1Q9UBU6 413 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 ASIC3Q9UHC3 531 aa28.08■■■□□ 2.09
SH3GL1-202ENST00000417295 COL27A1Q8IZC6 1860 aaPredicted RBP28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 IGHV1OR21-1A0A087WYE8 117 aa28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 PRAMEF33A0A0G2JMD5 474 aa28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 XRCC1P18887 633 aaPredicted RBP28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 CYP4F3Q08477 520 aa28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 SEMA3AQ14563 771 aa28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 METRNLQ641Q3 311 aa28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 LILRA3Q8N6C8 439 aaPredicted RBP28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 SGSM3Q96HU1 749 aa28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 SERPINB12Q96P63 405 aa28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 NUDT22Q9BRQ3 303 aa28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 PSMD13Q9UNM6 376 aa28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 PRSS21Q9Y6M0 314 aa28.07■■■□□ 2.08
SH3GL1-202ENST00000417295 A0A1W2PNU3 283 aaPredicted RBP28.06■■■□□ 2.08
SH3GL1-202ENST00000417295 RTP5Q14D33 572 aa28.06■■■□□ 2.08
SH3GL1-202ENST00000417295 RNASEH2BQ5TBB1 312 aaKnown RBP28.06■■■□□ 2.08
SH3GL1-202ENST00000417295 PPIL6Q8IXY8 311 aa28.06■■■□□ 2.08
SH3GL1-202ENST00000417295 TRIM56Q9BRZ2 755 aaKnown RBP28.06■■■□□ 2.08
SH3GL1-202ENST00000417295 STN1Q9H668 368 aaKnown RBP28.06■■■□□ 2.08
SH3GL1-202ENST00000417295 CCDC86Q9H6F5 360 aaKnown RBP28.06■■■□□ 2.08
SH3GL1-202ENST00000417295 MRM3Q9HC36 420 aaKnown RBP28.06■■■□□ 2.08
SH3GL1-202ENST00000417295 SOX13Q9UN79 622 aa28.06■■■□□ 2.08
SH3GL1-202ENST00000417295 CHD8Q9HCK8 2581 aa28.06■■■□□ 2.08
SH3GL1-202ENST00000417295 OR1I1O60431 355 aa28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 MLNP12872 115 aa28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 ARNTP27540 789 aa28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 CFHR1Q03591 330 aa28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 ITIH4Q14624 930 aa28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 MAP9Q49MG5 647 aa28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 KDF1Q8NAX2 398 aaPredicted RBP28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 ZCCHC14Q8WYQ9 949 aaKnown RBP28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 TBRG4Q969Z0 631 aaKnown RBP eCLIP28.05■■■□□ 2.081e-7■■■■■ 35.3
SH3GL1-202ENST00000417295 NXPE2Q96DL1 559 aa28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 MARCH4Q9P2E8 410 aaPredicted RBP28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 TPRP12270 2363 aaKnown RBP28.05■■■□□ 2.08
SH3GL1-202ENST00000417295 CCDC188H7C350 402 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 ZW10O43264 779 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 CPNE6O95741 557 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 MPOP05164 745 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 NSG1P42857 185 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 DR1Q01658 176 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 ZFP36L1Q07352 338 aaKnown RBP28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 FASTKD1Q53R41 847 aaKnown RBP28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 PACS1Q6VY07 963 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 LDB1Q86U70 411 aaPredicted RBP28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 PIM3Q86V86 326 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 CFAP206Q8IYR0 622 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 AGGF1Q8N302 714 aaeCLIP28.04■■■□□ 2.081e-6■■■□□ 15.3
SH3GL1-202ENST00000417295 SH3KBP1Q96B97 665 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 GRAMD1AQ96CP6 724 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 XAB2Q9HCS7 855 aaKnown RBP28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 AK5Q9Y6K8 562 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 ACACBO00763 2458 aa28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 ZFC3H1O60293 1989 aaKnown RBP28.04■■■□□ 2.08
SH3GL1-202ENST00000417295 KLHL33A6NCF5 533 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 TMEM8BA6NDV4 472 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 DNALI1O14645 258 aaPredicted RBP28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 VIPP01282 170 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 HOXB3P14651 431 aaPredicted RBP28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 IVDP26440 423 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 CSF2RBP32927 897 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 MAGEA3P43357 314 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 INHBCP55103 352 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 ZNF658BQ4V348 819 aaPredicted RBP28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 LYPLAL1Q5VWZ2 237 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 CASC4Q6P4E1 433 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 CERS6Q6ZMG9 384 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 ZNF574Q6ZN55 896 aaPredicted RBP28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 JAMLQ86YT9 394 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 SLITRK4Q8IW52 837 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 TRIM48Q8IWZ4 208 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 AVL9Q8NBF6 648 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 RUNDC3BQ96NL0 473 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 CCM2Q9BSQ5 444 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 TBC1D10AQ9BXI6 508 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 SEMA6CQ9H3T2 930 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 CATSPERZQ9NTU4 200 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 SATB2Q9UPW6 733 aa28.03■■■□□ 2.08
SH3GL1-202ENST00000417295 PMS2P1A4D2B8 440 aa28.02■■■□□ 2.08
SH3GL1-202ENST00000417295 AP2A2O94973 939 aa28.02■■■□□ 2.08
SH3GL1-202ENST00000417295 HALP42357 657 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms