RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 ZNF37AP17032 561 aaPredicted RBP14.03□□□□□ -0.16
SF3B1-204ENST00000414963 HTR1BP28222 390 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 CCR7P32248 378 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 CRHR1P34998 444 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 PDAP1Q13442 181 aaKnown RBP14.03□□□□□ -0.16
SF3B1-204ENST00000414963 PTK2BQ14289 1009 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 GBX1Q14549 363 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 TAF1BQ53T94 588 aaPredicted RBP14.03□□□□□ -0.16
SF3B1-204ENST00000414963 PLEKHS1Q5SXH7 462 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 PAQR3Q6TCH7 311 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 TMEM207Q6UWW9 146 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 RAPH1Q70E73 1250 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 C11orf96Q7Z7L8 435 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 PIM3Q86V86 326 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 TMEFF1Q8IYR6 380 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 KRT222Q8N1A0 295 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 C4orf33Q8N1A6 199 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 DEFB119Q8N690 84 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 OR13H1Q8NG92 308 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 OR56A4Q8NGH8 313 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 GIMAP7Q8NHV1 300 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 LKAAEAR1Q8TD35 194 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 WDR92Q96MX6 357 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 SLC6A18Q96N87 628 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 C1QTNF1Q9BXJ1 281 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 GPAMQ9HCL2 828 aa14.03□□□□□ -0.16
SF3B1-204ENST00000414963 EIF2B4Q9UI10 523 aaKnown RBP14.03□□□□□ -0.16
SF3B1-204ENST00000414963 TRMT6Q9UJA5 497 aaKnown RBP14.03□□□□□ -0.16
SF3B1-204ENST00000414963 SMG5Q9UPR3 1016 aaKnown RBP14.03□□□□□ -0.16
SF3B1-204ENST00000414963 CCDC189A1A4V9 331 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 OR2AG2A6NM03 316 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 MEI4A8MW99 385 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 GOLGA8RI6L899 631 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 KMOO15229 486 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 GRID2O43424 1007 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 KCNJ13O60928 360 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 POP7O75817 140 aaKnown RBP14.02□□□□□ -0.17
SF3B1-204ENST00000414963 CBSLP0DN79 551 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 CBSP35520 551 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 CCT5P48643 541 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 THOP1P52888 689 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 PGGT1BP53609 377 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 ZNF460Q14592 562 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 ANGPT1Q15389 498 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 TTLL9Q3SXZ7 439 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 PLK5Q496M5 336 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 PYCR3Q53H96 274 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 TPRG1LQ5T0D9 272 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 PMS2CLQ68D20 193 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 OTOAQ7RTW8 1153 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 LRRTM4Q86VH4 590 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 CENPLQ8N0S6 344 aaPredicted RBP14.02□□□□□ -0.17
SF3B1-204ENST00000414963 OXR1Q8N573 874 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 NKAPQ8N5F7 415 aaKnown RBP14.02□□□□□ -0.17
SF3B1-204ENST00000414963 ZBTB2Q8N680 514 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 SIDT2Q8NBJ9 832 aaKnown RBP14.02□□□□□ -0.17
SF3B1-204ENST00000414963 OR2L2Q8NH16 312 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 NAT14Q8WUY8 206 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 SNX19Q92543 992 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 KLHDC7BQ96G42 594 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 APOPT1Q96IL0 206 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 GPR78Q96P69 363 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 SLC30A3Q99726 388 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 COL25A1Q9BXS0 654 aaPredicted RBP14.02□□□□□ -0.17
SF3B1-204ENST00000414963 VPS11Q9H270 941 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 TM9SF3Q9HD45 589 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 PCMTD2Q9NV79 361 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 GULP1Q9UBP9 304 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 PCDHGA2Q9Y5H1 932 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 SLCO1B1Q9Y6L6 691 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 DOCK9Q9BZ29 2069 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 EML5Q05BV3 1969 aa14.02□□□□□ -0.17
SF3B1-204ENST00000414963 SPTY2D1-AS1A0A0U1RR47 76 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 SLC5A10A0PJK1 596 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 PRSS38A1L453 326 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 MGAT4DA6NG13 374 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 COPEO14579 308 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 GALR2O43603 387 aaPredicted RBP14.01□□□□□ -0.17
SF3B1-204ENST00000414963 GPC4O75487 556 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 SLCO2B1O94956 709 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 KLHL2O95198 593 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 TSPAN12O95859 305 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 CCDC166P0CW27 439 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 ENO3P13929 434 aaPredicted RBP14.01□□□□□ -0.17
SF3B1-204ENST00000414963 DGKAP23743 735 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 CD38P28907 300 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 IL2P60568 153 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 ARHGAP8P85298 464 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 PLOD1Q02809 727 aaPredicted RBP14.01□□□□□ -0.17
SF3B1-204ENST00000414963 DMPKQ09013 629 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 DOK6Q6PKX4 331 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 TBC1D1Q86TI0 1168 aaPredicted RBP14.01□□□□□ -0.17
SF3B1-204ENST00000414963 TRAPPC5Q8IUR0 188 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 SLC22A18ASQ8N1D0 253 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 PLD6Q8N2A8 252 aaKnown RBP14.01□□□□□ -0.17
SF3B1-204ENST00000414963 BEND7Q8N7W2 519 aaPredicted RBP14.01□□□□□ -0.17
SF3B1-204ENST00000414963 ANKRD49Q8WVL7 239 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 ASZ1Q8WWH4 475 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 OR1E3Q8WZA6 343 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 TIMM29Q9BSF4 260 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms