RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 SENP5Q96HI0 755 aaPredicted RBP4.81□□□□□ -1.64
ATG4C-204ENST00000414558 GFI1Q99684 422 aa4.81□□□□□ -1.64
ATG4C-204ENST00000414558 NCAPGQ9BPX3 1015 aa4.81□□□□□ -1.64
ATG4C-204ENST00000414558 INTS10Q9NVR2 710 aaKnown RBP4.81□□□□□ -1.64
ATG4C-204ENST00000414558 IRAK4Q9NWZ3 460 aa4.81□□□□□ -1.64
ATG4C-204ENST00000414558 TRMT1Q9NXH9 659 aaKnown RBP4.81□□□□□ -1.64
ATG4C-204ENST00000414558 OR2M5A3KFT3 312 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 A6NL46 340 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 ZNF500O60304 480 aaPredicted RBP4.8□□□□□ -1.64
ATG4C-204ENST00000414558 PLA2G4BP0C869 781 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 EIF4A2Q14240 407 aaKnown RBP4.8□□□□□ -1.64
ATG4C-204ENST00000414558 MEP1AQ16819 746 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 GORABQ5T7V8 394 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 ZNF790Q6PG37 636 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 ZNF497Q6ZNH5 498 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 FASTKD5Q7L8L6 764 aaKnown RBP4.8□□□□□ -1.64
ATG4C-204ENST00000414558 EXOC8Q8IYI6 725 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 PDILTQ8N807 584 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 UNC45AQ9H3U1 944 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 DIAPH3Q9NSV4 1193 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 ECHDC1Q9NTX5 307 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 ARHGEF40Q8TER5 1519 aa4.8□□□□□ -1.64
ATG4C-204ENST00000414558 LIPT2A6NK58 231 aa4.79□□□□□ -1.64
ATG4C-204ENST00000414558 ERI2A8K979 691 aaKnown RBP4.79□□□□□ -1.64
ATG4C-204ENST00000414558 J3QR06 171 aa4.79□□□□□ -1.64
ATG4C-204ENST00000414558 GPR137BO60478 399 aa4.79□□□□□ -1.64
ATG4C-204ENST00000414558 DDX58O95786 925 aaKnown RBP4.79□□□□□ -1.64
ATG4C-204ENST00000414558 SELLP14151 372 aa4.79□□□□□ -1.64
ATG4C-204ENST00000414558 LIFP15018 202 aa4.79□□□□□ -1.64
ATG4C-204ENST00000414558 MAP2K2P36507 400 aa4.79□□□□□ -1.64
ATG4C-204ENST00000414558 MFAP5Q13361 173 aa4.79□□□□□ -1.64
ATG4C-204ENST00000414558 MFSD6Q6ZSS7 791 aa4.79□□□□□ -1.64
ATG4C-204ENST00000414558 ZNF534Q76KX8 674 aa4.79□□□□□ -1.64
ATG4C-204ENST00000414558 HJURPQ8NCD3 748 aaPredicted RBP4.79□□□□□ -1.64
ATG4C-204ENST00000414558 SEMA6AQ9H2E6 1030 aa4.79□□□□□ -1.64
ATG4C-204ENST00000414558 FLT1P17948 1338 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 TMEM8BA6NDV4 472 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 TMEM189-UBE2V1I3L0A0 370 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 ITGA3P26006 1051 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 PRAMEP78395 509 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 GAGE2BQ13066 116 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 UBE2V1Q13404 147 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 ZFP69Q49AA0 526 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 GAGE2EQ4V326 116 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 SH2D5Q6ZV89 423 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 GPALPP1Q8IXQ4 340 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 DDHD1Q8NEL9 900 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 OR2T12Q8NG77 320 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 TDRD7Q8NHU6 1098 aaKnown RBP4.78□□□□□ -1.64
ATG4C-204ENST00000414558 ELMOD3Q96FG2 381 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 ART5Q96L15 291 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 ZNF599Q96NL3 588 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 RHNO1Q9BSD3 238 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 MUC13Q9H3R2 512 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 SH2D4AQ9H788 454 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 SETD4Q9NVD3 440 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 PTTG2Q9NZH5 202 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 COQ3Q9NZJ6 369 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 GAGE2DQ9UEU5 116 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 KCNJ14Q9UNX9 436 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 PIAS3Q9Y6X2 628 aa4.78□□□□□ -1.64
ATG4C-204ENST00000414558 CSPG5O95196 566 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 ZNF26P17031 533 aaPredicted RBP4.77□□□□□ -1.65
ATG4C-204ENST00000414558 CHMP24386 653 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 LUMP51884 338 aaPredicted RBP4.77□□□□□ -1.65
ATG4C-204ENST00000414558 IRX1P78414 480 aaPredicted RBP4.77□□□□□ -1.65
ATG4C-204ENST00000414558 KCNJ10P78508 379 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 RARS2Q5T160 578 aaKnown RBP4.77□□□□□ -1.65
ATG4C-204ENST00000414558 GKAP1Q5VSY0 366 aaPredicted RBP4.77□□□□□ -1.65
ATG4C-204ENST00000414558 JAKMIP3Q5VZ66 844 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 ALS2CLQ60I27 953 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 FAM109BQ6ICB4 259 aaPredicted RBP4.77□□□□□ -1.65
ATG4C-204ENST00000414558 JADE1Q6IE81 842 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 PXKQ7Z7A4 578 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 GALNT5Q7Z7M9 940 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 GALNT13Q8IUC8 556 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 PLD3Q8IV08 490 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 CEP97Q8IW35 865 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 DENND2DQ9H6A0 471 aaPredicted RBP4.77□□□□□ -1.65
ATG4C-204ENST00000414558 FGF22Q9HCT0 170 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 SIX2Q9NPC8 291 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 DNAJB4Q9UDY4 337 aa4.77□□□□□ -1.65
ATG4C-204ENST00000414558 TEX13DA0A0J9YY54 714 aaPredicted RBP4.76□□□□□ -1.65
ATG4C-204ENST00000414558 MAGEB17A8MXT2 336 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 A8MZ25 164 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 PLK4O00444 970 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 SLC22A2O15244 555 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 EXTL3O43909 919 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 RNASEH2AO75792 299 aaKnown RBP4.76□□□□□ -1.65
ATG4C-204ENST00000414558 CLPTM1O96005 669 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 SRPRAP08240 638 aaKnown RBP4.76□□□□□ -1.65
ATG4C-204ENST00000414558 CKMT2P17540 419 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 EPHA2P29317 976 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 HSP90AB4PQ58FF6 505 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 TMEM154Q6P9G4 183 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 ISCA2Q86U28 154 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 TICAM1Q8IUC6 712 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 MAPK1IP1LQ8NDC0 245 aa4.76□□□□□ -1.65
ATG4C-204ENST00000414558 SEMA4DQ92854 862 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms