RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 DCUN1D1Q96GG9 259 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 CDKN2AIPNLQ96HQ2 116 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 ZNF514Q96K75 400 aaPredicted RBP14.55□□□□□ -0.08
LIMS4-201ENST00000413601 CMKLR1Q99788 373 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.55□□□□□ -0.08
LIMS4-201ENST00000413601 WASH6PQ9NQA3 447 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 TRMT1Q9NXH9 659 aaKnown RBP14.55□□□□□ -0.08
LIMS4-201ENST00000413601 FAM8A1Q9UBU6 413 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 PSMD13Q9UNM6 376 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 LHX6Q9UPM6 363 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 DNMT3AQ9Y6K1 912 aaPredicted RBP14.55□□□□□ -0.08
LIMS4-201ENST00000413601 H7C0S8 307 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 SGTAO43765 313 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 DUX1O43812 170 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 GAS8O95995 478 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 SLC5A2P31639 672 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 ETV5P41161 510 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 MLLT3P42568 568 aaPredicted RBP14.54□□□□□ -0.08
LIMS4-201ENST00000413601 ABCG1P45844 678 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 GPR33Q49SQ1 333 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 TMEM71Q6P5X7 295 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 TMEM26Q6ZUK4 368 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 TAS2R42Q7RTR8 314 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 CLEC14AQ86T13 490 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 SERPINA9Q86WD7 417 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 JAMLQ86YT9 394 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 SLC35F6Q8N357 371 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 PRELID2Q8N945 189 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 NCSTNQ92542 709 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 TMEM159Q96B96 161 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 CXorf40BQ96DE9 158 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 CRELD1Q96HD1 420 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 MS4A14Q96JA4 679 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 COPS8Q99627 209 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 DPYSL5Q9BPU6 564 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 CASS4Q9NQ75 786 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 HOMER3Q9NSC5 361 aa14.54□□□□□ -0.08
LIMS4-201ENST00000413601 TRBV5-4A0A0C4DH59 114 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 MGAT4DA6NG13 374 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 OR51F1A6NGY5 319 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 LILRA5A6NI73 299 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 THRAP10827 490 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 RALBP11234 206 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 CCL4P13236 92 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 ATP1B2P14415 290 aaPredicted RBP14.53□□□□□ -0.08
LIMS4-201ENST00000413601 ACRV1P26436 265 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 HALP42357 657 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 ARSDP51689 593 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 MAPK10P53779 464 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 EPHA4P54764 986 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 BASP1P80723 227 aaKnown RBP14.53□□□□□ -0.08
LIMS4-201ENST00000413601 CACNG1Q06432 222 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 SKIDA1Q1XH10 827 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 BCL7AQ4VC05 210 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 SNAP47Q5SQN1 464 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 METRNLQ641Q3 311 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 WDR74Q6RFH5 385 aaPredicted RBP14.53□□□□□ -0.08
LIMS4-201ENST00000413601 C4orf22Q6V702 233 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 SPACA3Q8IXA5 215 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 PIANPQ8IYJ0 282 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 OR2L2Q8NH16 312 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 KCNE4Q8WWG9 221 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 ANP32BQ92688 251 aaKnown RBP14.53□□□□□ -0.08
LIMS4-201ENST00000413601 PBKQ96KB5 322 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 UCK1Q9HA47 277 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 SLC40A1Q9NP59 571 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 POT1Q9NUX5 634 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 ZDHHC3Q9NYG2 299 aa14.53□□□□□ -0.08
LIMS4-201ENST00000413601 AKAP7Q9P0M2 348 aaPredicted RBP14.53□□□□□ -0.08
LIMS4-201ENST00000413601 SDK2Q58EX2 2172 aa14.52□□□□□ -0.08
LIMS4-201ENST00000413601 IGLV3-16A0A075B6K0 115 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 HEATR9A2RTY3 570 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 CCDC162PA2VCL2 907 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 A8MU76 341 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 CFAP99D6REC4 459 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 HGSO14964 777 aaPredicted RBP14.52□□□□□ -0.09
LIMS4-201ENST00000413601 TYRP1P17643 537 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 PSMA3P25788 255 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 MSNP26038 577 aaKnown RBP14.52□□□□□ -0.09
LIMS4-201ENST00000413601 TRA2AQ13595 282 aaKnown RBP eCLIP14.52□□□□□ -0.09
LIMS4-201ENST00000413601 GPR18Q14330 331 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 TRIP13Q15645 432 aaPredicted RBP14.52□□□□□ -0.09
LIMS4-201ENST00000413601 RPE65Q16518 533 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 OR13J1Q8NGT2 312 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 HEXDCQ8WVB3 486 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 USP7Q93009 1102 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 PDLIM2Q96JY6 352 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 ZNF778Q96MU6 729 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 RANBP9Q96S59 729 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 AP1M1Q9BXS5 423 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 WWP1Q9H0M0 922 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 SMARCAL1Q9NZC9 954 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 OGFRQ9NZT2 677 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 PDP2Q9P2J9 529 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 SLC2A6Q9UGQ3 507 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 PCDHGA7Q9Y5G6 932 aa14.52□□□□□ -0.09
LIMS4-201ENST00000413601 CFAP20Q9Y6A4 193 aaKnown RBP14.52□□□□□ -0.09
LIMS4-201ENST00000413601 DSPP15924 2871 aaKnown RBP14.52□□□□□ -0.09
LIMS4-201ENST00000413601 USP27XA6NNY8 438 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms