RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SMAD5Q99717 465 aaKnown RBP9.37□□□□□ -0.91
RFFL-203ENST00000413582 BAG1Q99933 345 aaPredicted RBP9.37□□□□□ -0.91
RFFL-203ENST00000413582 TIMM29Q9BSF4 260 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 WASH6PQ9NQA3 447 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 FGF21Q9NSA1 209 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.37□□□□□ -0.91
RFFL-203ENST00000413582 ASF1BQ9NVP2 202 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 DTLQ9NZJ0 730 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 PKD2L2Q9NZM6 624 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 RPL26L1Q9UNX3 145 aaKnown RBP9.37□□□□□ -0.91
RFFL-203ENST00000413582 DNAJC16Q9Y2G8 782 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 MTORP42345 2549 aa9.37□□□□□ -0.91
RFFL-203ENST00000413582 PKDREJQ9NTG1 2253 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 PCM1Q15154 2024 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 RGSL1A5PLK6 1076 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 MFSD11O43934 449 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 TMEM63AO94886 807 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 JCHAINP01591 159 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 SERPING1P05155 500 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 SKILP12757 684 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 ZNF7P17097 686 aaPredicted RBP9.36□□□□□ -0.91
RFFL-203ENST00000413582 IL4RP24394 825 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 RPL10P27635 214 aaKnown RBP9.36□□□□□ -0.91
RFFL-203ENST00000413582 PCK1P35558 622 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 ITGA1P56199 1179 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 CCZ1BP86790 482 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 CCZ1P86791 482 aaPredicted RBP9.36□□□□□ -0.91
RFFL-203ENST00000413582 ACY1Q03154 408 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 ITKQ08881 620 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 ASIC2Q16515 512 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 QPCTQ16769 361 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 AGAP9Q5VTM2 703 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 FAM69BQ5VUD6 431 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 ALS2CLQ60I27 953 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 HGSNATQ68CP4 663 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 WASH2PQ6VEQ5 465 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 LRRTM4Q86VH4 590 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 BPHLQ86WA6 291 aaPredicted RBP9.36□□□□□ -0.91
RFFL-203ENST00000413582 TMEM139Q8IV31 216 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 ZNF547Q8IVP9 402 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 IQCKQ8N0W5 287 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 SLC34A3Q8N130 599 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 GLIS1Q8NBF1 620 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 TTC13Q8NBP0 860 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 SLC38A9Q8NBW4 561 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 GPR150Q8NGU9 434 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 ARRDC2Q8TBH0 407 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 HSPH1Q92598 858 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 MR1Q95460 341 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 EID2BQ96D98 161 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 CXorf40BQ96DE9 158 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 RANBP9Q96S59 729 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 MAP3K3Q99759 626 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 SPATA16Q9BXB7 569 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 CHST8Q9H2A9 424 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 PCDH9Q9HC56 1237 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 PCDH18Q9HCL0 1135 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 TRIM39Q9HCM9 518 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 GPR83Q9NYM4 423 aa9.36□□□□□ -0.91
RFFL-203ENST00000413582 NFKBIL1Q9UBC1 381 aaPredicted RBP9.36□□□□□ -0.91
RFFL-203ENST00000413582 G3BP2Q9UN86 482 aaKnown RBP9.36□□□□□ -0.91
RFFL-203ENST00000413582 HIVEP1P15822 2718 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 PDZD2O15018 2839 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 ANKUB1A6NFN9 424 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 TLCD2A6NGC4 264 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 A6NL46 340 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 TMCO5BA8MYB1 307 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 KMOO15229 486 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 ZNF185O15231 689 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 MTX2O75431 263 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 SCRG1O75711 98 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 SLC25A14O95258 325 aaPredicted RBP9.35□□□□□ -0.91
RFFL-203ENST00000413582 HLA-DQB2P05538 268 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 CA4P22748 312 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 CYLC1P35663 651 aaPredicted RBP9.35□□□□□ -0.91
RFFL-203ENST00000413582 DRG2P55039 364 aaKnown RBP9.35□□□□□ -0.91
RFFL-203ENST00000413582 DCDC1P59894 354 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 TUBB4BP68371 445 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 PDE1BQ01064 536 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 NIPAL4Q0D2K0 466 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 GALNT2Q10471 571 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 TUBB2AQ13885 445 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 PLEKHN1Q494U1 663 aaPredicted RBP9.35□□□□□ -0.91
RFFL-203ENST00000413582 KHDC1Q4VXA5 237 aaKnown RBP9.35□□□□□ -0.91
RFFL-203ENST00000413582 ANKRD20A8PQ5CZ79 823 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 VWA5B1Q5TIE3 1220 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 TXNRD3NBQ6F5E7 133 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 LCN10Q6JVE6 187 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 PPP1R2P3Q6NXS1 205 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 FAM198BQ6UWH4 519 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 ZNF571Q7Z3V5 609 aaPredicted RBP9.35□□□□□ -0.91
RFFL-203ENST00000413582 C11orf96Q7Z7L8 435 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 KMT5CQ86Y97 462 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 TMEM126BQ8IUX1 230 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 LRRC49Q8IUZ0 686 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 D2HGDHQ8N465 521 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 ENDOVQ8N8Q3 282 aaKnown RBP9.35□□□□□ -0.91
RFFL-203ENST00000413582 TMEM102Q8N9M5 508 aaPredicted RBP9.35□□□□□ -0.91
RFFL-203ENST00000413582 CCHCR1Q8TD31 782 aa9.35□□□□□ -0.91
RFFL-203ENST00000413582 GLYATL1Q969I3 302 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms