RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ARL8BQ9NVJ2 186 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 CFAP97Q9P2B7 532 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 CPSF2Q9P2I0 782 aaKnown RBP16.96■□□□□ 0.3
PTPRC-206ENST00000413409 TRIM33Q9UPN9 1127 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 VPS9D1Q9Y2B5 631 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 VWA7Q9Y334 891 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 RAP2CQ9Y3L5 183 aa16.96■□□□□ 0.3
PTPRC-206ENST00000413409 C2orf81A6NN90 581 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 ZNF195O14628 629 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 WFS1O76024 890 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 RBP1P09455 135 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 ZNF883P0CG24 379 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 GNSP15586 552 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 ATP5F1P24539 256 aaPredicted RBP16.95■□□□□ 0.3
PTPRC-206ENST00000413409 CSNK1DP48730 415 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 RPL26P61254 145 aaKnown RBP16.95■□□□□ 0.3
PTPRC-206ENST00000413409 RHOAP61586 193 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 SLC20A2Q08357 652 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 PRKAA1Q13131 559 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 SNCBQ16143 134 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 PIWIL4Q7Z3Z4 852 aaKnown RBP16.95■□□□□ 0.3
PTPRC-206ENST00000413409 MAVSQ7Z434 540 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 TTC7BQ86TV6 843 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 ZNF513Q8N8E2 541 aaPredicted RBP16.95■□□□□ 0.3
PTPRC-206ENST00000413409 PRR11Q96HE9 360 aaPredicted RBP16.95■□□□□ 0.3
PTPRC-206ENST00000413409 CDKN2AIPNLQ96HQ2 116 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 UBXN10Q96LJ8 280 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 NDNQ99608 321 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 CDC6Q99741 560 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 C19orf43Q9BQ61 176 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 GPAMQ9HCL2 828 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 PNPOQ9NVS9 261 aa16.95■□□□□ 0.3
PTPRC-206ENST00000413409 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.95■□□□□ 0.3
PTPRC-206ENST00000413409 USP9XQ93008 2570 aaPredicted RBP16.94■□□□□ 0.3
PTPRC-206ENST00000413409 OR51F1A6NGY5 319 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 SLCO1B7G3V0H7 640 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 CCL22O00626 93 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 FZD6O60353 706 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 DLX3O60479 287 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 ZNF217O75362 1048 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 HLA-EP13747 358 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 HOXB2P14652 356 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 LPOP22079 712 aaPredicted RBP16.94■□□□□ 0.3
PTPRC-206ENST00000413409 GRIA4P48058 902 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 GLRBP48167 497 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 SRSF1Q07955 248 aaKnown RBP eCLIP16.94■□□□□ 0.3
PTPRC-206ENST00000413409 ACAP2Q15057 778 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 PTPRNQ16849 979 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 HLA-BQ31612 363 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 LINGO4Q6UY18 593 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 ATG14Q6ZNE5 492 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 TTC30BQ8N4P2 665 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 WFDC5Q8TCV5 224 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 DNASE2BQ8WZ79 361 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 ACOX2Q99424 681 aa16.94■□□□□ 0.3
PTPRC-206ENST00000413409 AARSD1Q9BTE6 412 aaKnown RBP16.94■□□□□ 0.3
PTPRC-206ENST00000413409 ILKAPQ9H0C8 392 aaPredicted RBP16.94■□□□□ 0.3
PTPRC-206ENST00000413409 TEX15Q9BXT5 2789 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 A0A1B0GTW7 788 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.93■□□□□ 0.3
PTPRC-206ENST00000413409 TBC1D3BA6NDS4 549 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 F8W8V4 182 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 H7C0S8 307 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 TRIM24O15164 1050 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 ATP6V1G2O95670 118 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 PENKP01210 267 aaPredicted RBP16.93■□□□□ 0.3
PTPRC-206ENST00000413409 PIRTP0C851 137 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 ADH5P11766 374 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 IDH3AP50213 366 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 PLK1P53350 603 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 CDKN2DP55273 166 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 CSHL1Q14406 222 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 CCDC157Q569K6 752 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 WDR45BQ5MNZ6 344 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 DHRS13Q6UX07 377 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 GPR155Q7Z3F1 870 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 BBS7Q8IWZ6 715 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 KIRREL3Q8IZU9 778 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 ZNF781Q8N8C0 355 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 FIBINQ8TAL6 211 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 MAGEC3Q8TD91 643 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 DDI1Q8WTU0 396 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 UTP4Q969X6 686 aaKnown RBP16.93■□□□□ 0.3
PTPRC-206ENST00000413409 MYO19Q96H55 970 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 RILPQ96NA2 401 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 EBF4Q9BQW3 602 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 CCDC106Q9BWC9 280 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 VTI1BQ9UEU0 232 aa16.93■□□□□ 0.3
PTPRC-206ENST00000413409 TEX51A0A1B0GUA7 166 aa16.92■□□□□ 0.3
PTPRC-206ENST00000413409 ANKRD66B4E2M5 251 aa16.92■□□□□ 0.3
PTPRC-206ENST00000413409 PFDN6O15212 129 aa16.92■□□□□ 0.3
PTPRC-206ENST00000413409 SOCS5O75159 536 aa16.92■□□□□ 0.3
PTPRC-206ENST00000413409 NDUFS2O75306 463 aa16.92■□□□□ 0.3
PTPRC-206ENST00000413409 CYBBP04839 570 aa16.92■□□□□ 0.3
PTPRC-206ENST00000413409 PDHA1P08559 390 aa16.92■□□□□ 0.3
PTPRC-206ENST00000413409 ESRRAP11474 423 aaPredicted RBP16.92■□□□□ 0.3
PTPRC-206ENST00000413409 CD9P21926 228 aa16.92■□□□□ 0.3
PTPRC-206ENST00000413409 NTSR1P30989 418 aa16.92■□□□□ 0.3
PTPRC-206ENST00000413409 NUMBP49757 651 aa16.92■□□□□ 0.3
PTPRC-206ENST00000413409 CLDN6P56747 220 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms