RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CRYBG3Q68DQ2 2970 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 KLF18A0A0U1RQI7 1052 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TARSL2A2RTX5 802 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 A8MX80 341 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 MS4A18H0YCH9 400 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TEX46H3BTG2 121 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 DNASE2O00115 360 aaPredicted RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 CES2O00748 559 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TNFSF11O14788 317 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 FLRT2O43155 660 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SOX15O60248 233 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 KLK8O60259 260 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SNAP91O60641 907 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 GALR3O60755 368 aaPredicted RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 CLN5O75503 358 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 YIF1AO95070 293 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SEC24AO95486 1093 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TBX18O95935 607 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 LHBP01229 141 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TCF3P15923 654 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TCP1P17987 556 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 EPORP19235 508 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 CDK11BP21127 795 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TTKP33981 857 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 MAPK9P45984 424 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC6A12P48065 614 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 BLKP51451 505 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 MNAT1P51948 309 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 HCCSP53701 268 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 HDAC4P56524 1084 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SNX16P57768 344 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SELENOVP59797 346 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 DEFB1P60022 68 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 RPS8P62241 208 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 GNB2P62879 340 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC7A9P82251 487 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 LIPEQ05469 1076 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 ST3GAL4Q11206 333 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 DPYSL3Q14195 570 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 IHHQ14623 411 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SMC1AQ14683 1233 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 KPNB1Q14974 876 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TGIF1Q15583 401 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 Q1RN00 199 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 P3H1Q32P28 736 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 LGALSLQ3ZCW2 172 aaPredicted RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 NDUFAF5Q5TEU4 345 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 MARC1Q5VT66 337 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 ISM2Q6H9L7 571 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 UFSP1Q6NVU6 142 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC30A10Q6XR72 485 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 Q6ZS92 163 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 ASCL5Q7RTU5 278 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 GPSM1Q86YR5 675 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TMEM139Q8IV31 216 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM114A1Q8IWE2 563 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 CISD2Q8N5K1 135 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SIRT6Q8N6T7 355 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF283Q8N7M2 679 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 USP38Q8NB14 1042 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TNIP2Q8NFZ5 429 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 DIS3LQ8TF46 1054 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SETD7Q8WTS6 366 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC44A1Q8WWI5 657 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF606Q8WXB4 792 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 STON2Q8WXE9 905 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 FRZBQ92765 325 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 RBPMSQ93062 196 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SNRNP40Q96DI7 357 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 PDLIM5Q96HC4 596 aaKnown RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 DMRTA2Q96SC8 542 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 PSMB7Q99436 277 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 VKORC1Q9BQB6 163 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 HIPK3Q9H422 1215 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 BCO1Q9HAY6 547 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 ELL3Q9HB65 397 aaPredicted RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 NLE1Q9NVX2 485 aaPredicted RBP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SOHLH2Q9NX45 425 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 NUDT4Q9NZJ9 180 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 UVRAGQ9P2Y5 699 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 CTSFQ9UBX1 484 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SUN2Q9UH99 717 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 JPT1Q9UK76 154 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 ADAM28Q9UKQ2 775 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 CLEC4EQ9ULY5 219 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 STUB1Q9UNE7 303 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SCML2Q9UQR0 700 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 ANGPT4Q9Y264 503 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 PIAS3Q9Y6X2 628 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 DCHS1Q96JQ0 3298 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 TMEM131Q92545 1883 aa-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-1.63□□□□□ -2.67
RNU4-88P-201ENST00000411220 SH3TC1Q8TE82 1336 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 MIA2Q96PC5 1412 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 USF3Q68DE3 2245 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 DOCK4Q8N1I0 1966 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 TRGV2A0A075B6R0 118 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 A0A1B0GWJ7 208 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 A0A1W2PQH9 124 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 LOC730098B7Z3J9 87 aa-1.64□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms