RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 PACS1Q6VY07 963 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 DENND5BQ6ZUT9 1274 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 CACNA2D4Q7Z3S7 1137 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 PTAR1Q7Z6K3 402 aaPredicted RBP1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 ERC1Q8IUD2 1116 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 PLD3Q8IV08 490 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 CEP97Q8IW35 865 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 CCDC146Q8IYE0 955 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 CNTROBQ8N137 903 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 SLC5A8Q8N695 610 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 OR4C3Q8NH37 302 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 HPSE2Q8WWQ2 592 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 KIF1BPQ96EK5 621 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 GIMAP5Q96F15 307 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 LCE3DQ9BYE3 92 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 GPR63Q9BZJ6 419 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 SLC25A18Q9H1K4 315 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 PANK4Q9NVE7 773 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 MTMR10Q9NXD2 777 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 LIMA1Q9UHB6 759 aaKnown RBP1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 TSPYL4Q9UJ04 414 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 GJD2Q9UKL4 321 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 TNNQ9UQP3 1299 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 NAALADL1Q9UQQ1 740 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 AAR2Q9Y312 384 aaKnown RBP1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 RABGAP1Q9Y3P9 1069 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 RIPK3Q9Y572 518 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 GON4LQ3T8J9 2241 aa1.24□□□□□ -2.21
RNU2-55P-201ENST00000411146 OR2M5A3KFT3 312 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 MSGN1A6NI15 193 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 PRR32B1ATL7 298 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 H3BQ06 376 aaPredicted RBP1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 TMEM189-UBE2V1I3L0A0 370 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 J3QR06 171 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 SOCS3O14543 225 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 ZNF195O14628 629 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 TNFSF14O43557 240 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 ZNF217O75362 1048 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 CDC123O75794 336 aaPredicted RBP1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 CKMT2P17540 419 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 NFKBIAP25963 317 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 GRK6P43250 576 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 RIGQ13278 110 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 UBE2V1Q13404 147 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 PEX6Q13608 980 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 RRS1Q15050 365 aaKnown RBP1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 ZNF805Q5CZA5 627 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 SLC25A30Q5SVS4 291 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 TMEM198Q66K66 360 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 LDHAL6AQ6ZMR3 332 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 CLEC17AQ6ZS10 378 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 LRRC8DQ7L1W4 858 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 ISCA2Q86U28 154 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 PM20D2Q8IYS1 436 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 NKAPQ8N5F7 415 aaKnown RBP1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 PAF1Q8N7H5 531 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 SLC38A9Q8NBW4 561 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 OR1J2Q8NGS2 313 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 ZPLD1Q8TCW7 415 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 GTF3C6Q969F1 213 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 CCDC136Q96JN2 1154 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 MAELQ96JY0 434 aaKnown RBP1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 WDFY2Q96P53 400 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 TRAF4Q9BUZ4 470 aaPredicted RBP1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 LRRC61Q9BV99 259 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 SLA2Q9H6Q3 261 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 ATP13A3Q9H7F0 1226 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 BRF2Q9HAW0 419 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 SCPEP1Q9HB40 452 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 ASAH2Q9NR71 780 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 GPR83Q9NYM4 423 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 HAO1Q9UJM8 370 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 SARDHQ9UL12 918 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 RALGAPA1Q6GYQ0 2036 aa1.23□□□□□ -2.21
RNU2-55P-201ENST00000411146 SOS1Q07889 1333 aaPredicted RBP1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 IGHV4-61A0A0C4DH41 118 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 LRRC53A6NM62 1247 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 EIF4E1BA6NMX2 242 aaKnown RBP1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 ANKRD66B4E2M5 251 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 EIF3FO00303 357 aaPredicted RBP1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 CSPG5O95196 566 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 IGHV4-59P01825 116 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 GPIP06744 558 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 ZNF182P17025 639 aaPredicted RBP1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 RBMS1P29558 406 aaKnown RBP1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 HOXC9P31274 260 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 PSMC2P35998 433 aaKnown RBP1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 CPOXP36551 454 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 OPRL1P41146 370 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 GABRB2P47870 512 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 TUBP50607 506 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 F2RL1P55085 397 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 KCNJ10P78508 379 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 FOXD4Q12950 439 aaPredicted RBP1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 PTP4A2Q12974 167 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 NFATC2Q13469 925 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 CAMK1Q14012 370 aa1.22□□□□□ -2.21
RNU2-55P-201ENST00000411146 EFR3AQ14156 821 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms