RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 FAM45BPQ6NSW5 357 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 CHST15Q7LFX5 561 aaPredicted RBP16.5■□□□□ 0.23
PDK1-203ENST00000410055 RAB44Q7Z6P3 723 aaPredicted RBP16.5■□□□□ 0.23
PDK1-203ENST00000410055 TICAM1Q8IUC6 712 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 ADCY4Q8NFM4 1077 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 FAM45AQ8TCE6 357 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 ASB9Q96DX5 294 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 CDK5RAP1Q96SZ6 601 aaKnown RBP16.5■□□□□ 0.23
PDK1-203ENST00000410055 TLR8Q9NR97 1041 aaKnown RBP16.5■□□□□ 0.23
PDK1-203ENST00000410055 ZMAT5Q9UDW3 170 aaKnown RBP16.5■□□□□ 0.23
PDK1-203ENST00000410055 PCDHGC4Q9Y5F7 938 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 DGKBQ9Y6T7 804 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 MROH6A6NGR9 719 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 SLC22A2O15244 555 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 SERPINF2P08697 491 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 IRF1P10914 325 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 CD1DP15813 335 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 CCDC117Q8IWD4 279 aaPredicted RBP16.5■□□□□ 0.23
PDK1-203ENST00000410055 PAF1Q8N7H5 531 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 VPS35Q96QK1 796 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 HBEGFQ99075 208 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 SLC25A23Q9BV35 468 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 EPS8L2Q9H6S3 715 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 RNF112Q9ULX5 631 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 ENPP3O14638 875 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 GPR39O43194 453 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 HGFP14210 728 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 RGRP47804 291 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 HERVK_113P63132 956 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 TSNQ15631 228 aaKnown RBP16.5■□□□□ 0.23
PDK1-203ENST00000410055 NADSYN1Q6IA69 706 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 RGMBQ6NW40 437 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 SLC24A5Q71RS6 500 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 C16orf59Q7L2K0 433 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 RETREG3Q86VR2 466 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 COLGALT2Q8IYK4 626 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 ZNF683Q8IZ20 524 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 CLYBLQ8N0X4 340 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 TWIST2Q8WVJ9 160 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 PSD2Q9BQI7 771 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 ERVK-6Q9BXR3 956 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 POLR1BQ9H9Y6 1135 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 ZNF229Q9UJW7 825 aa16.5■□□□□ 0.23
PDK1-203ENST00000410055 PRSS51A0A1B0GVH4 220 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 SAC3D1A6NKF1 404 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CBX4O00257 560 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CAPN1P07384 714 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 MSL3P1P0C860 447 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CKBP12277 381 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 RPL17P18621 184 aaKnown RBP16.49■□□□□ 0.23
PDK1-203ENST00000410055 EEF1DP29692 281 aaKnown RBP16.49■□□□□ 0.23
PDK1-203ENST00000410055 PLIN5Q00G26 463 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 IFITM3Q01628 133 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CREB5Q02930 508 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 RAB39AQ14964 217 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 AGAP7PQ5VUJ5 663 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 RSPO2Q6UXX9 243 aaPredicted RBP16.49■□□□□ 0.23
PDK1-203ENST00000410055 LARP4Q71RC2 724 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDK1-203ENST00000410055 FUNDC1Q8IVP5 155 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CANT1Q8WVQ1 401 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 FIG4Q92562 907 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CITED4Q96RK1 184 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 TCF12Q99081 682 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 NEK6Q9HC98 313 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 ATP13A1Q9HD20 1204 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 DNMT3BQ9UBC3 853 aaKnown RBP16.49■□□□□ 0.23
PDK1-203ENST00000410055 GALPQ9UBC7 116 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 UGT2A1Q9Y4X1 527 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CDC7O00311 574 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CLASP2O75122 1294 aaKnown RBP16.49■□□□□ 0.23
PDK1-203ENST00000410055 OAZ2O95190 189 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 ZNF37AP17032 561 aaPredicted RBP16.49■□□□□ 0.23
PDK1-203ENST00000410055 AGTR2P50052 363 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 IL10RBQ08334 325 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 NFATC3Q12968 1075 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 MBTPS1Q14703 1052 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 TRIP4Q15650 581 aaPredicted RBP16.49■□□□□ 0.23
PDK1-203ENST00000410055 SNAP47Q5SQN1 464 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CHSY3Q70JA7 882 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 AKAP14Q86UN6 197 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CATSPER1Q8NEC5 780 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 DNAJB14Q8TBM8 379 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 DLG3Q92796 817 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 CDKN2AIPNLQ96HQ2 116 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 OSBPL11Q9BXB4 747 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 PNPLA3Q9NST1 481 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 COMMD10Q9Y6G5 202 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 SCN4AP35499 1836 aa16.49■□□□□ 0.23
PDK1-203ENST00000410055 F5H5T6 163 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 TOR1BO14657 336 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 AZIN1O14977 448 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 ANGPT2O15123 496 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 NDUFS3O75489 264 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 BCL10O95999 233 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 TACR2P21452 398 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 PRDX3P30048 256 aaKnown RBP16.48■□□□□ 0.23
PDK1-203ENST00000410055 DIO3P55073 304 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 FCGRTP55899 365 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 PRSS55Q6UWB4 352 aaPredicted RBP16.48■□□□□ 0.23
PDK1-203ENST00000410055 LINGO4Q6UY18 593 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms