RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PNLIPP16233 465 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 NSG1P42857 185 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 FASLGP48023 281 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 CBLBQ13191 982 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 NFE2L1Q14494 772 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 NR1D2Q14995 579 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 AGAP9Q5VTM2 703 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 TMPRSS7Q7RTY8 843 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 IGDCC3Q8IVU1 814 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 OR2L2Q8NH16 312 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 ZNF669Q96BR6 464 aaPredicted RBP21.97■■□□□ 1.11
PTCD3-203ENST00000409783 STAMBPL1Q96FJ0 436 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 CCDC3Q9BQI4 270 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 WDR83Q9BRX9 315 aaKnown RBP21.97■■□□□ 1.11
PTCD3-203ENST00000409783 DPH5Q9H2P9 285 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 GRHL1Q9NZI5 618 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 WHRNQ9P202 907 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 LRIT1Q9P2V4 623 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 MAD1L1Q9Y6D9 718 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 FAM221BA6H8Z2 402 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 GOLGA8KD6RF30 607 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 GOLGA8TH3BQL2 631 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 USP1O94782 785 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 VCLP18206 1134 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 IDSP22304 550 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.96■■□□□ 1.11
PTCD3-203ENST00000409783 CDCP2Q5VXM1 449 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 METRNLQ641Q3 311 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 GPR150Q8NGU9 434 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 EBNA1BP2Q99848 306 aaKnown RBP21.96■■□□□ 1.11
PTCD3-203ENST00000409783 PLAC1Q9HBJ0 212 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 WDR37Q9Y2I8 494 aa21.96■■□□□ 1.11
PTCD3-203ENST00000409783 KNTC1P50748 2209 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 UNC13CQ8NB66 2214 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 KIR2DS5A0A0G2JLQ3 304 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 A0A0G2JNG1 304 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 C17orf113A0A1B0GUU1 675 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 KLHL33A6NCF5 533 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 OR5K4A6NMS3 321 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 KIR2DS3K7RE56 304 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 SPINK2P20155 84 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 RPL10P27635 214 aaKnown RBP21.95■■□□□ 1.1
PTCD3-203ENST00000409783 PBLDP30039 288 aaPredicted RBP21.95■■□□□ 1.1
PTCD3-203ENST00000409783 DRG2P55039 364 aaKnown RBP21.95■■□□□ 1.1
PTCD3-203ENST00000409783 SHC2P98077 582 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 KIR2DS5Q14953 304 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 TYSND1Q2T9J0 566 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 BBS9Q3SYG4 887 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 DNAJC21Q5F1R6 531 aaKnown RBP21.95■■□□□ 1.1
PTCD3-203ENST00000409783 AARS2Q5JTZ9 985 aaKnown RBP21.95■■□□□ 1.1
PTCD3-203ENST00000409783 PDIK1LQ8N165 341 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 MMGT1Q8N4V1 131 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 LILRA3Q8N6C8 439 aaPredicted RBP21.95■■□□□ 1.1
PTCD3-203ENST00000409783 MAPK15Q8TD08 544 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 SCNM1Q9BWG6 230 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 IL1RAPL1Q9NZN1 696 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 ZNF624Q9P2J8 865 aaPredicted RBP21.95■■□□□ 1.1
PTCD3-203ENST00000409783 KLK13Q9UKR3 277 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 FAM169AQ9Y6X4 670 aa21.95■■□□□ 1.1
PTCD3-203ENST00000409783 A0A1W2PQM1 296 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 E7ESA3 106 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 NTN3O00634 580 aaPredicted RBP21.94■■□□□ 1.1
PTCD3-203ENST00000409783 SLC2A4P14672 509 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 PGAM1P18669 254 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 XRCC1P18887 633 aaPredicted RBP21.94■■□□□ 1.1
PTCD3-203ENST00000409783 PAMP19021 973 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 TTPAP49638 278 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 UBE2IP63279 158 aaKnown RBP21.94■■□□□ 1.1
PTCD3-203ENST00000409783 CLCA4Q14CN2 919 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 TRADDQ15628 312 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 SEPT7Q16181 437 aaKnown RBP21.94■■□□□ 1.1
PTCD3-203ENST00000409783 HIF1AQ16665 826 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 HES3Q5TGS1 186 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 SPRED1Q7Z699 444 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 TMPRSS12Q86WS5 348 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 BBOF1Q8ND07 529 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 HM13Q8TCT9 377 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 TTC1Q99614 292 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 CCM2Q9BSQ5 444 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 LRRC1Q9BTT6 524 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 P2RY12Q9H244 342 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 SARS2Q9NP81 518 aaKnown RBP21.94■■□□□ 1.1
PTCD3-203ENST00000409783 TEX264Q9Y6I9 313 aa21.94■■□□□ 1.1
PTCD3-203ENST00000409783 PDZK1P1A8MUH7 402 aa21.93■■□□□ 1.1
PTCD3-203ENST00000409783 BHMG1C9JSJ3 638 aaPredicted RBP21.93■■□□□ 1.1
PTCD3-203ENST00000409783 NDC80O14777 642 aa21.93■■□□□ 1.1
PTCD3-203ENST00000409783 B4GAT1O43505 415 aa21.93■■□□□ 1.1
PTCD3-203ENST00000409783 PPARGP37231 505 aaPredicted RBP21.93■■□□□ 1.1
PTCD3-203ENST00000409783 SLC19A1P41440 591 aa21.93■■□□□ 1.1
PTCD3-203ENST00000409783 CRYMQ14894 314 aa21.93■■□□□ 1.1
PTCD3-203ENST00000409783 NEPROQ6NW34 567 aa21.93■■□□□ 1.1
PTCD3-203ENST00000409783 CENPUQ71F23 418 aa21.93■■□□□ 1.1
PTCD3-203ENST00000409783 MARCH9Q86YJ5 346 aa21.93■■□□□ 1.1
PTCD3-203ENST00000409783 UNC5BQ8IZJ1 945 aa21.93■■□□□ 1.1
PTCD3-203ENST00000409783 CACTIN-AS1Q8N1I8 211 aa21.93■■□□□ 1.1
PTCD3-203ENST00000409783 NOA1Q8NC60 698 aaKnown RBP21.93■■□□□ 1.1
PTCD3-203ENST00000409783 OR52A4PA6NMU1 304 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 QSOX1O00391 747 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 POLBP06746 335 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 OGNP20774 298 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms