RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 TUBD1Q9UJT1 453 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 AAR2Q9Y312 384 aaKnown RBP14.47□□□□□ -0.09
CBX3-203ENST00000409747 MACROD2A1Z1Q3 448 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 C2orf81A6NN90 581 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 STX7O15400 261 aaKnown RBP14.46□□□□□ -0.09
CBX3-203ENST00000409747 MSH3P20585 1137 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 CTNNA2P26232 953 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 RBL1P28749 1068 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 AKT1P31749 480 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 CTNNA1P35221 906 aaKnown RBP14.46□□□□□ -0.09
CBX3-203ENST00000409747 POLE2P56282 527 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 PRPSAP1Q14558 356 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 CLCA4Q14CN2 919 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 GPRC6AQ5T6X5 926 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 ATG14Q6ZNE5 492 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 RASGEF1AQ8N9B8 481 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 RSC1A1Q92681 617 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 TRIM10Q9UDY6 481 aa14.46□□□□□ -0.09
CBX3-203ENST00000409747 LOC101059948A0A1B0GTJ6 334 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 CCDC66A2RUB6 948 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 UGT1A9O60656 530 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 POP7O75817 140 aaKnown RBP14.46□□□□□ -0.1
CBX3-203ENST00000409747 PRAMEF1O95521 474 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 UGT1A6P19224 532 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 LPOP22079 712 aaPredicted RBP14.46□□□□□ -0.1
CBX3-203ENST00000409747 UGT1A1P22309 533 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 UGT1A4P22310 534 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 PTPN7P35236 360 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 STAT5AP42229 794 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 LEPRP48357 1165 aaKnown RBP14.46□□□□□ -0.1
CBX3-203ENST00000409747 SEPHS1P49903 392 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 PDE1BQ01064 536 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 CRTC2Q53ET0 693 aaPredicted RBP14.46□□□□□ -0.1
CBX3-203ENST00000409747 CACHD1Q5VU97 1274 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 IRGCQ6NXR0 463 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 TMEM220Q6QAJ8 160 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 TIPARPQ7Z3E1 657 aaKnown RBP14.46□□□□□ -0.1
CBX3-203ENST00000409747 BEND7Q8N7W2 519 aaPredicted RBP14.46□□□□□ -0.1
CBX3-203ENST00000409747 OR6C1Q96RD1 312 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 PANX2Q96RD6 677 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 FICDQ9BVA6 458 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 CLMPQ9H6B4 373 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 UGT1A7Q9HAW7 530 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 UGT1A10Q9HAW8 530 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 UGT1A8Q9HAW9 530 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 WDR37Q9Y2I8 494 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 PCDHA3Q9Y5H8 950 aa14.46□□□□□ -0.1
CBX3-203ENST00000409747 C5orf60A6NFR6 353 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 OR2AG2A6NM03 316 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 PJA2O43164 708 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 NDUFA10O95299 355 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 WISP1O95388 367 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 PYGMP11217 842 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 FECHP22830 423 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 CTSCP53634 463 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 NAP1L1P55209 391 aaKnown RBP14.45□□□□□ -0.1
CBX3-203ENST00000409747 KCNC4Q03721 635 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 CDC20Q12834 499 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 KCNAB2Q13303 367 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 PLCL1Q15111 1095 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 TAF1AQ15573 450 aaPredicted RBP14.45□□□□□ -0.1
CBX3-203ENST00000409747 RASGRP3Q8IV61 690 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 ACTL9Q8TC94 416 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 ZNF398Q8TD17 642 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 KLHL6Q8WZ60 621 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 STARD8Q92502 1023 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 UBXN4Q92575 508 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 STAMBPL1Q96FJ0 436 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 OSBPL8Q9BZF1 889 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 TFR2Q9UP52 801 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 RPS6KL1Q9Y6S9 549 aa14.45□□□□□ -0.1
CBX3-203ENST00000409747 SETXQ7Z333 2677 aaKnown RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 GAPDHSO14556 408 aaPredicted RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 GPR39O43194 453 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 BUD23O43709 281 aaKnown RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 CRTAMO95727 393 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 AGTP01019 485 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 RWDD2BP57060 319 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 OTUD4Q01804 1114 aaKnown RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 RPE65Q16518 533 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 FNBP1LQ5T0N5 605 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 C6orf15Q6UXA7 325 aaPredicted RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 FAM92BQ6ZTR7 304 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 TMTC1Q8IUR5 882 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 UNC5BQ8IZJ1 945 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 C19orf43Q9BQ61 176 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 ARL5AQ9Y689 179 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 EPN1Q9Y6I3 576 aaPredicted RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 TLN1Q9Y490 2541 aaKnown RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 BTNL10A8MVZ5 291 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 SUV39H1O43463 412 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 SRP72O76094 671 aaKnown RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 TJP3O95049 919 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 MT-ND3P03897 115 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 PRKAR1AP10644 381 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 RBP3P10745 1247 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 RALBP11234 206 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 MTHFD1P11586 935 aaKnown RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 FGF5P12034 268 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 NELFEP18615 380 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms