RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 VIMP08670 466 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 ELFN1P0C7U0 828 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CASRP41180 1078 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 ARL4CP56559 192 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 EIF3EP60228 445 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 PARP15Q460N3 678 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 SCYL2Q6P3W7 929 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 ARHGEF18Q6ZSZ5 1173 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CYP4V2Q6ZWL3 525 aaPredicted RBP12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 DPPA4Q7L190 304 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CCDC13Q8IYE1 715 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 NAT8LQ8N9F0 302 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 DYDC1Q8WWB3 177 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CPT1BQ92523 772 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CCT6BQ92526 530 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 ECHDC3Q96DC8 303 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 SGSM3Q96HU1 749 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 SLC39A8Q9C0K1 460 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 WDR26Q9H7D7 661 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 NKIRAS1Q9NYS0 192 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 AKAP7Q9P0M2 348 aaPredicted RBP12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 LOC101059948A0A1B0GTJ6 334 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 TRAFD1O14545 582 aaPredicted RBP12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 IFNB1P01574 187 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 NTRK1P04629 796 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CD48P09326 243 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 PRKAR1AP10644 381 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 THRAP10827 490 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CREB1P16220 341 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 KELP23276 732 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 GCAP28676 217 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 RPL22P35268 128 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CCR10P46092 362 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 POLD2P49005 469 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 PAPOLAP51003 745 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 DYNLT1P63172 113 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 GRM3Q14832 879 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 ACOX1Q15067 660 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 PDK2Q15119 407 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 NOMO1Q15155 1222 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 PTPRRQ15256 657 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 HIF1AQ16665 826 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 BOLA3Q53S33 107 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 ANKRD20A8PQ5CZ79 823 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 SLC30A9Q6PML9 568 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 ARHGAP36Q6ZRI8 547 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 TRABD2AQ86V40 505 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 PACS2Q86VP3 889 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 UNC5BQ8IZJ1 945 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 HSPH1Q92598 858 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 COQ10AQ96MF6 247 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 PSMG3-AS1Q96PY0 264 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 TUBGCP5Q96RT8 1024 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 PEBP4Q96S96 227 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 SPRY4Q9C004 299 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 KCNK9Q9NPC2 374 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 GPATCH2LQ9NWQ4 482 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 SLC39A1Q9NY26 324 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 B4GALT6Q9UBX8 382 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 PCSK1NQ9UHG2 260 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 TUBD1Q9UJT1 453 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 SUFUQ9UMX1 484 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 CAPN7Q9Y6W3 813 aa12.59□□□□□ -0.39
CHRNA1-205ENST00000409542 USP9XQ93008 2570 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 IGHV1OR21-1A0A087WYE8 117 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 PRPF4O43172 522 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 PRPSAP2O60256 369 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 SNX3O60493 162 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 GSTA1P08263 222 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 MYCLP1P12525 358 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 DESP17661 470 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 STIP1P31948 543 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 PHBP35232 272 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 GNPDA1P46926 289 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 CSNK1DP48730 415 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 GDF10P55107 478 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 CTBSQ01459 385 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 PDIA2Q13087 525 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 MPP2Q14168 576 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 DPYSL3Q14195 570 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 FASTKD3Q14CZ7 662 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 TMED2Q15363 201 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 ATP1A1-AS1Q5TC04 95 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 ANKS6Q68DC2 871 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 TIPARPQ7Z3E1 657 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 ZNF761Q86XN6 746 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 MAP7D3Q8IWC1 876 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 SRRM1Q8IYB3 904 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 ZBED8Q8IZ13 594 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 BMPERQ8N8U9 685 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 OR4D9Q8NGE8 314 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 ABHD17AQ96GS6 310 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 MAGEB18Q96M61 343 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 CTRCQ99895 268 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 PLCD4Q9BRC7 762 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 DDA1Q9BW61 102 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 MAK16Q9BXY0 300 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 FRMD8Q9BZ67 464 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 CATSPERBQ9H7T0 1116 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms